Gene Dde_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1667 
Symbol 
ID3756664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp1721318 
End bp1722070 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content50% 
IMG OID637782546 
ProductTPR repeat-containing protein 
Protein accessionYP_388159 
Protein GI78356710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00162147 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTGATA GCGAATTGTA TCCTGAAATT CTTGGCGTGT ACTCTCTGCA GCAGGAAACA 
ACTGTGGGAG TTGGAGGGAC CCAGTCGTTC AAGCATCAGG TGACGTATTG GTATGTACGC 
AGGCTTTCAG AGGATGTTTA CGAGGTGCAG CCTCTGAATG CTCATCATGT GCCATCGGGC 
ATACGGCGGG AACATCCTGA ACTGGATTTT TTGCGTATGT ATGTTCCCGA GCCTGATTAT 
TACAGAACGC ATACTGTTCC GGCTCTGAAT TCATTAAACA GAAAGCTGAA GGAGGGGGAG 
ACTCTTCTGG ATATCGGCCG GCTTGATGAT GCAGAGCGTA TGTTCATCAA GGCTCTTATG 
ATTGACGATC TGAATGTTCC TGCCAATTAC GGTCTTGGCG AAGTCTATTC TGAAAAAAAG 
GACTTCCGCA GGCTAAAGCG TGTCATCGAC ACGTTGCTGG GACTTGATCA GGTTTTTTGT 
AAAGAGCAGA AAAGCCGGTT TAACAGGTTC GGCATCAGCC TGCGCAAAAA CGGGCATTAT 
GAAGAATCGC TGCGTTTTTA TGAACGGGCT TTGCAGGTGG CGGAAGATGA TCACCTGCAC 
TTTAATGTTG CCCGGGTGCA TTACGAAAAA GGGGCGGTGG ACAAATGCAT AAGCCACCTT 
CAGCGGGCGC TGGAGCTTAA CCCTGACTTC TCCGAGGCGG AGAAGTTTCT GCGCTACTGC 
GGCGGTTCTG CCAGTGTGCA GCGTGCCGGA TAA
 
Protein sequence
MSDSELYPEI LGVYSLQQET TVGVGGTQSF KHQVTYWYVR RLSEDVYEVQ PLNAHHVPSG 
IRREHPELDF LRMYVPEPDY YRTHTVPALN SLNRKLKEGE TLLDIGRLDD AERMFIKALM 
IDDLNVPANY GLGEVYSEKK DFRRLKRVID TLLGLDQVFC KEQKSRFNRF GISLRKNGHY 
EESLRFYERA LQVAEDDHLH FNVARVHYEK GAVDKCISHL QRALELNPDF SEAEKFLRYC 
GGSASVQRAG