Gene Dde_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1612 
Symbol 
ID3755039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp1660320 
End bp1661771 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content57% 
IMG OID637782491 
Producthypothetical protein 
Protein accessionYP_388104 
Protein GI78356655 
COG category 
COG ID 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCTGTG AATGGTTACT GACGCAGCTG TGCCGGTTGC GGCTGTGCGC CGGTCAGGTC 
GGTTATGCGG CACAGATAGA CGGCTTGCAG GGGATTCTGC AGGCTTTTTT CTTTTACGGC 
GCTGTTGACC TGCACCGGGG TTGCACGGCA AACAGGATGC TGCCGCAGGG CATACGGGCA 
TGTGACGGGA GAATCAGTGT GGAAATACGC TATGACAAGA CTGCGCGCAG TGTGAAGCAA 
CTGCAGCAGA CGCTGGCAGC CTATCTGGAT GCGCTGCCGG CGCTGATGTG GCATGTGGAT 
ACCGTGCGTA ACGAGATGAT ATTTTTTAAT GATCATAAGG TTGCGGGGCT TAACGGCAAG 
ATACCTCTCA TGCTGCGCAA TATGTCTCTG GCGCAGGCTC TGGTGCACCC TGACGACTTC 
AGTGTGTTTC GCGGAGCGCT TGATGCGGTG CGGGTTCTCC AGCCATGTTC AGTGTCCTTT 
CGTGTGCATG ACGATGCAGG CAACTGGCAC TGGCTGGTGC TGATGGGAAT GCCCGCACCT 
GACGAGTCTT TCGGGTACGT GGGGCTGGCT GCGGAATGCA CCTCTCTGGT GGAGTCCATG 
ATGGAAAGAG GGGCGGACAG CCTGCTGGCG GGCAGTATGG AATTGCTCGA CAGCCCGGCT 
CTTCTTGTTG ATTTCACGAC CAAAAATGTA CAGGCCGCCA ATGCTGCGGC ATGTGTATGC 
TTCGGCTATG CCGCAGCTGC CGACTTTCCT TCGTTTGAAA CGATGCTGGA GGGAACAGGA 
GAGCAGTACA GGCGCAGCAT ATACGAGCAC CTTATTTTTC ACGCATCATG GCGGGGGGCA 
CTCACCTTGG CGGGCAACGG CGGCATGCGC ATGTGTTGCC GGGCGCAGCT GCGTCCCGTC 
TCCCGTGAAG GCCATAATTA TCTGTGGGTC AGTCTTACAC CTGCGGTGCA GCCTGCAGAA 
GCAGCGCCCG TATCAAGCCC TGTTTCCGCC GCGCTGCGCG AAGCCCTCAG CCGCGCAGCC 
GATGATATGT CCGCCCTGAC CGCAGTGCTG GAACATCAGC CGCAGGGTAT GCAGGCGGAA 
GGGGTTATGC TGTCCCGTAT TTACGCAGCC GACGATAAAG TTGAAGTGAC AGGGGCGGGA 
GTTCCTTTTG ACGGCATGGA ACCCGGTACG GCCTACCCTT ACAGAGGGTC CATCGCAGAG 
AATATTGTCC GTTACAACCT GCCTTATCTT GTGGTCGATG AAACTGCACG CAGCATACGG 
CCCATTGACT GGGCTCTGTT CATTCCCGGC GGTATTCACT CTTATTATGC CGAACCGTTC 
TATGCAGGGG ATACTCTGAA ATATGTGCTG ATTTACTGTT CTACCCGCAG CGAGGCTTTT 
TCCGCCGACG GCGCACCCGC CTGCAAGGAG GTGGTCAGGC TTCTTGCTCA GACTCTGAAG 
CGGCTGGACT GA
 
Protein sequence
MGCEWLLTQL CRLRLCAGQV GYAAQIDGLQ GILQAFFFYG AVDLHRGCTA NRMLPQGIRA 
CDGRISVEIR YDKTARSVKQ LQQTLAAYLD ALPALMWHVD TVRNEMIFFN DHKVAGLNGK 
IPLMLRNMSL AQALVHPDDF SVFRGALDAV RVLQPCSVSF RVHDDAGNWH WLVLMGMPAP 
DESFGYVGLA AECTSLVESM MERGADSLLA GSMELLDSPA LLVDFTTKNV QAANAAACVC 
FGYAAAADFP SFETMLEGTG EQYRRSIYEH LIFHASWRGA LTLAGNGGMR MCCRAQLRPV 
SREGHNYLWV SLTPAVQPAE AAPVSSPVSA ALREALSRAA DDMSALTAVL EHQPQGMQAE 
GVMLSRIYAA DDKVEVTGAG VPFDGMEPGT AYPYRGSIAE NIVRYNLPYL VVDETARSIR 
PIDWALFIPG GIHSYYAEPF YAGDTLKYVL IYCSTRSEAF SADGAPACKE VVRLLAQTLK 
RLD