| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1600 |
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| Symbol | |
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| ID | 3755027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1629268 |
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| End bp | 1631415 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637782479 |
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| Product | receptor precursor-mostly Fe transport |
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| Protein accession | YP_388092 |
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| Protein GI | 78356643 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.147311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTATT ATGCAAAGCA ATGGGGAGGC TTCGTTGCCT TAGGCTTTCT GCTGCTTGCG
ACCCCGTGGG CCGCTTTGGC AGAAGATGGA AAAAACTCAC CTCAGACTGA TAAAGAAACT
CACTATCAGC TTGATACTGT CACTGTCACA GTGGAAAAAC GCGAACAGAA CTCTCAGGAT
GTGCCAGCCA GCCTTTCTGT TCTTTCTGAA ACAGCCATAG AAGATGCCGG GCTGACCTCC
GTTGAAGAGG CGGTTTCCTA CATGCCCAAC ATCCACTTCA TTGACTTCGG CGCCGCATTC
GAACAGCGCA TATTCATGCG CGGACTCGGC TCCACACATA ACGCTCCGGC TGTAAACTTC
AACATCGACG GCGTCACGCA GTTCCGCAGC GAATCGCTGG ACATGGCCCT GTACGATATT
GAAAGCATAG AGGTGCTGCG CGGGCCTCAG GGCACCCTGT ACGGCAGAAA CAGTCTTGGC
GGTGTTATCA ATATTACAAC CCGCAAGCCG GACAACGAAC TGCGCGGGCA GATACGCACC
GACTTCGGCA ACTACAATCT GCAGCAGTAT CAGGGTACTG TCAGCGGGCC GGTAATCAAA
GACAGTCTGT ACCTCGGGCT GGCGGGCTCG TACAAAGTCC GCGACGGATT CACCAAAAAC
GACTTTCTCG ACAACGATGT CGACAACATG GAATCGGTAG ACGGCCGGGT ACATCTGCGC
CTTGCCCCTG CAGACAGCAA CTTTGAAGCC AACCTCAAAC TGTATGCCGA AGGCGACAGA
CACGGCACCT CTGCCCTGCA GCTTCTGGAC GATGTAAAAG ACAACCCTCA CACCGCCAAC
TTCGACCATG TGTCGGATAC ACACAGGCAG GTGCTGGGCA GTTCGCTTTC GCTTGAATGG
AAACTTGATG ACGGAGTATT CACCAGCATT TCCGCTTTCC AGAAGCTGAA CCTCTGGTCC
GACTCCGACT TCGACTTTTC CACCGCAGAC ATGAACACGT TTACCAACGA CAGTGAAAGC
TACCAGTATT CACAGGAATT GCGGTACTCG GCCGGAACCG ACAAAGATAT CTTCCGCTGG
ACAACCGGCG TGTACGCATG GGGCAGCCAG CAGGAAGATA TCTCCTCCAC CACCGACGGC
AAAGATATGC CGCCCATGTT CGGCTTTCCC GGCAATGCAA ACCACAACAA AGCCGATCTT
GAAGGTTATG GTTTTGCTCC GTTCGGTCAG GCCACGGTCA CCGTTTTTGA CAAGCTGGAC
CTGACGGCAG GCATAAGGTG GGAATGGGAA AAACGTGACG GTGATTTTCA CGACTATACC
GAACGCGCCG ACACAGGCAC CACGGTGGAA AACCTGAAAG GCAGCGACAG CATCATTTCC
CAGCAGTGGC TGCCCAAATT TTCGGCGGCA TACCACTTTA CCGATAACCT GATGGCCTAT
GCATCGCTGG CGTGGGGTTA CCGTTCCGGC GGGTTCAACT TCATGTACGA CCCTAACAAT
CCGGAATCCG TCAGCTTTGA TCCTGAAACT TCCATAAACT ATGAAGTCGG CGTCAAATCC
ACCTGGCTGG ACAACAGACT GTACGCCAAC CTGTCTGCCT ACTATATCGA AATTGAAGAC
ATGCAGGTTT CGGTGGGTAT TCCCGGCAAA ATGACCATGC TTGTCGACAA CGCAGGTGAA
GCGCATTCCC GCGGAGCCGA ACTGGAAGTT GGTGTGCGCC CCTTCACAGG CATGGATATC
AACGCTTCAT ACGGCTATAC CGAAATGGAA TACGACAAGT ACACAGATCC TGTTAAAAAC
GTGGATTATT CCGGCAAGAC GCCCCCGTAT GTGCCCAACC ATACCTACTC GCTCTCTGCC
CAGTACCGCT ACCCGCTTAC CGATACGCTT ACGCTTTTCA CGCGGGGTGA AGTCATCGGC
GTGGGCAAAC AGTACTGGGG CAGCGACAAC GCGGTAAGCG AAGACCCGTA TCAGCTGCTC
AATGCCAGAA TCGGGGTCGA ATCCGAAGAC TTTGACGTAT ACCTGTACGG CAAAAACCTC
ACAGATCAGG AATACCGCAA AATCGGCTAT CTGACCGGCA TGGGCGCCGT CTATGCCCAG
TCGGGAGATC CGCTGACCTT CGGCGTCAAC CTCGTCTACC GTTTCTAG
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| Protein sequence | MLYYAKQWGG FVALGFLLLA TPWAALAEDG KNSPQTDKET HYQLDTVTVT VEKREQNSQD
VPASLSVLSE TAIEDAGLTS VEEAVSYMPN IHFIDFGAAF EQRIFMRGLG STHNAPAVNF
NIDGVTQFRS ESLDMALYDI ESIEVLRGPQ GTLYGRNSLG GVINITTRKP DNELRGQIRT
DFGNYNLQQY QGTVSGPVIK DSLYLGLAGS YKVRDGFTKN DFLDNDVDNM ESVDGRVHLR
LAPADSNFEA NLKLYAEGDR HGTSALQLLD DVKDNPHTAN FDHVSDTHRQ VLGSSLSLEW
KLDDGVFTSI SAFQKLNLWS DSDFDFSTAD MNTFTNDSES YQYSQELRYS AGTDKDIFRW
TTGVYAWGSQ QEDISSTTDG KDMPPMFGFP GNANHNKADL EGYGFAPFGQ ATVTVFDKLD
LTAGIRWEWE KRDGDFHDYT ERADTGTTVE NLKGSDSIIS QQWLPKFSAA YHFTDNLMAY
ASLAWGYRSG GFNFMYDPNN PESVSFDPET SINYEVGVKS TWLDNRLYAN LSAYYIEIED
MQVSVGIPGK MTMLVDNAGE AHSRGAELEV GVRPFTGMDI NASYGYTEME YDKYTDPVKN
VDYSGKTPPY VPNHTYSLSA QYRYPLTDTL TLFTRGEVIG VGKQYWGSDN AVSEDPYQLL
NARIGVESED FDVYLYGKNL TDQEYRKIGY LTGMGAVYAQ SGDPLTFGVN LVYRF
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