| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1588 |
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| Symbol | |
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| ID | 3754994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1615004 |
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| End bp | 1618207 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637782466 |
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| Product | ATP-dependent DNA helicase UvrD |
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| Protein accession | YP_388080 |
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| Protein GI | 78356631 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCAAC AGATAAAGGC GTCTGCCGGT TCCGGCAAGA CGTACCGGCT TACCGGTGAA
TTTCTTGACC GGCTGCGCGC CGCGTCCGAA GAGTCTTCCG CCGCCTGTGC ATTAGCCCCT
GCGGGCGCGG CTTACTGCTG GCCTGAAATA CTGGCCGTCA CCTTCACCAA CAAGGCCGCC
ACGGAAATGC AGGAACGCAT TATCCGTACC CTAAAGGAAC GGGCTCTGGG CATGGGCGCC
AGCGGCCCCG CGGCTGACTG GCCGGCGTCA GGAGCGCGCC GCTGGGTGAA CACCATGCTG
CGGCGGTATT CTTCGCTCAA TGTGCGCACC ATAGACAGCC TGCTGCATAT GCTTGTACGG
CTGTGTGCTC TAGAGCTCGG CCTGCCGCCG GACTTCGAGC CGGTCTTTGA CGAAGAGGAA
ATTTTCACCC CGCTGTACGA ACGCATGCTC GAACAGGCCC GCAGCGGTTC TCATCAGCTC
CGGCAACAGC TGGTGGATGC TTCGGAGTCG CTGCTGTATC ACGCCGACAT GCAGGGCTTT
ATGGCGGGCA ACTCCCTGCG CGAAAGGCTG CTTCACCTTA TGCGGTACCG CCTGCGCCAT
CCCGAGGAAG AAATGCCTTG CGTCGACGCC GCAGAGCTGA AGACCCGCAT GGCTGAACAT
ATGCATGCAC TGCAGGCATC CGCAGGTTTT CTTCTGCAGG GCATTGAACG CGAAAAACTG
GCAGCCAGTG CGCACTATGT CAATTTTCTC AAAAAACTGC CGCCTCTCGG CAGTCTTTCC
GTCGTTCCCG AATCAAAAAT GGGAACCAAG CCGGATATTG ACGACTGCCT GAACAAAAAA
TCAAAGGGAA CCGCATCTGC AGACATGCGC CGTGCCCATG ATGAGCTGAC CAGAGCGTAC
GGCTGGCTGA GCCGGGAAGG CAAACTGATG CGCCGCGCCC TGCAGCAGGC GCCGTTCATC
ACCCTTATCA ACCTGCTTAC AGAACAGGCC CAGAGCATGC TCAAGCAGGA AGGGCTGGTA
CCCAACGCGC TCTGGCCCGC TTATGCCCGC ACCGTGCTGT CCGGCGAGGC CGGCGCGTCC
GAAGCGTTCT GCCGCATGGG CACCCGCCTT ACGCATCTGC TGGTGGACGA ATTTCAGGAT
ACCAGCCGGG ATCAGTGGCA GGCCATCATG CCGCTGGCCA CTGAATGTCT GGCCAAGGGG
GGCAGCGTCA CTTACGTGGG CGACGTAAAG CAGGCCATTT ACAGCTGGCG CGGCGGCGAT
TCCGACCTGT TTGACGGCGC TCTGGAAGAA CCGGAACTGC GGGCCATATG CCCCTCTCCG
CGCCAGCTGC TCCTGCCGTT CAACTGGCGA AGCAGCGAAA TTGTGGTGAC CACCAACAAC
CGGCTGTTCG AGCCCCTCGG TTCCGGCCAA TCAGCACTGG CTGCCGCACG CGCCATCTGC
GATGACGACG CTCCCGAAGA AGTTATCCAA GAAGCAGCGT CACGCATTCT GCGCTCCTTT
ACCGGCACCG CCCAGCAGGT GCCGGAACAC AGACAAGGCT CGGGTGGTCT GGTACGGCTG
TACGACCTGT ACGCCGATTC TTCGGAAGAT CTGTATGAAA GTGTGAAGGA AGAACTGCAC
AGACTTATCA CTGAAGAACT TTCCGGACGC CGCCAGTGGC GCGACATTGC CGTACTTGTC
CGCTCAAACC CTGAAGCCGG ACGGGTGGCC GAATGGCTTG TGGAATGGGA TATTCCCATC
ATCACCGAAA ACAGTCTGCG GCTTGCCGAC CACCCGCTGA TCACGCAGAC CGTGGCATTT
TTGCGTTTTC TCGACTACCC GCTGGATGAA CTGGCGCTGT GCGAAGTGCT CTGCGGATGC
GAACTGTTCG GCGGAGCAGG CGGACTCGCT CGTGCCAGCC TTGACGGGCA GCTTGCAACG
CGCGGTGACA GGCCGCTCAT CACATGGCTG CGGGAAACTT ACCCCGACAT ATGGAAAACA
TGGTTTGCCC CGTTTTATAC TCAGGCAGGC CTGATGAGCG CGTATGATAC GGTGCAGGAA
CTTTTCAACC GGTTCATGGT CTGCCGCCGC CACCCTGCGG ATACCGTGTT CATCCGCAGG
TTTCTAGAAA TAGTCCACGC TGCGGATGCC AGAGGACTGC GCTCGTTGTC CACATTTCTG
GAATACTGGC AGCAACACGG CACGGAAGAA AAAGTGCCCA TGCCCGATAA TCTTGATGCG
GTGCGCATCA TGACCATGCA TAAATCCAAA GGCCTTGAAT TTCCGGTGGT CATCATCCCA
TTTCATCATC ACACGCTGCA AAACGACAAC ACGCCGGTGC GCACCACTGT GGACGGGCAG
GACGTCATGG TTGCAGCCTG TGCCGAACTG GGTGCGCAGT GGTACGCCGC ACGGGCACGT
GACGCATGTG AGCAACTTAA TCTGCTGTAT GTGGCGTGGA CCCGTCCCGT GGATGAACTG
CATGCCTTTC TCGGCTGCAC CTCCCGCAAC GAAAATAAAG CACCTATGCT ATCCGCTCTG
CGTGTCATGC TGGGAGAAGA TTACCCCGCA CGGGGCGAAA CGGTGCAATG GGGCGAAACA
CCGCACGCAC AGGCTGCAGG CAGCAGCCCC GCCGGCACAA CCGCCGATGC CGTGCAGCAG
CCATGCGCTG GCTCCGCCCC ATGTTCCGCC CCTGCGGAAC CGGCAGCGGC GCTGCAGAAC
TGGATGCCCA TGGACTGGTT GCCCACGCTC AAGATTTTCC GCAATCCGCT TGAAGATGTG
GTTTTTGACG AACGCAGACG GGGAGAACTG GCGCACAGCT GCATGGAGTC ACTCAAGCTG
ACAGGTGACA CGGAAAGCGA TATCCGCAGA GCTGTCAGCC ATGCGTTGGA AAAATGCCCT
TTTCCTGTAC CGGACAAAGA AAGCACCGCG CAGGAACTGC ATGGCATGCT GCGCTGGGCT
GCCTCTCTGC CTGACATGCC CCGCTGGCTT GCGCACGGAC AACCGGAACA AAGCGTCATG
GACGCCGACG GTGCTTTGCA CCGCGTGGAC CTGCTGGTGG ATGACGGGCA CACCCGTACC
GTTGTGGAAT ACAAAACCGG AGCACAATCT GCCGCCCACA GGCAGCAGGT ATCGCGCTAT
CTCAACCTGC TGCGGCAGAT TTCCCCCGTG CCTGCGGCAG GCGTCATCAT CTATCTGGAT
CTGCAGCAAA CAGTCACGGT ATAA
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| Protein sequence | MLQQIKASAG SGKTYRLTGE FLDRLRAASE ESSAACALAP AGAAYCWPEI LAVTFTNKAA
TEMQERIIRT LKERALGMGA SGPAADWPAS GARRWVNTML RRYSSLNVRT IDSLLHMLVR
LCALELGLPP DFEPVFDEEE IFTPLYERML EQARSGSHQL RQQLVDASES LLYHADMQGF
MAGNSLRERL LHLMRYRLRH PEEEMPCVDA AELKTRMAEH MHALQASAGF LLQGIEREKL
AASAHYVNFL KKLPPLGSLS VVPESKMGTK PDIDDCLNKK SKGTASADMR RAHDELTRAY
GWLSREGKLM RRALQQAPFI TLINLLTEQA QSMLKQEGLV PNALWPAYAR TVLSGEAGAS
EAFCRMGTRL THLLVDEFQD TSRDQWQAIM PLATECLAKG GSVTYVGDVK QAIYSWRGGD
SDLFDGALEE PELRAICPSP RQLLLPFNWR SSEIVVTTNN RLFEPLGSGQ SALAAARAIC
DDDAPEEVIQ EAASRILRSF TGTAQQVPEH RQGSGGLVRL YDLYADSSED LYESVKEELH
RLITEELSGR RQWRDIAVLV RSNPEAGRVA EWLVEWDIPI ITENSLRLAD HPLITQTVAF
LRFLDYPLDE LALCEVLCGC ELFGGAGGLA RASLDGQLAT RGDRPLITWL RETYPDIWKT
WFAPFYTQAG LMSAYDTVQE LFNRFMVCRR HPADTVFIRR FLEIVHAADA RGLRSLSTFL
EYWQQHGTEE KVPMPDNLDA VRIMTMHKSK GLEFPVVIIP FHHHTLQNDN TPVRTTVDGQ
DVMVAACAEL GAQWYAARAR DACEQLNLLY VAWTRPVDEL HAFLGCTSRN ENKAPMLSAL
RVMLGEDYPA RGETVQWGET PHAQAAGSSP AGTTADAVQQ PCAGSAPCSA PAEPAAALQN
WMPMDWLPTL KIFRNPLEDV VFDERRRGEL AHSCMESLKL TGDTESDIRR AVSHALEKCP
FPVPDKESTA QELHGMLRWA ASLPDMPRWL AHGQPEQSVM DADGALHRVD LLVDDGHTRT
VVEYKTGAQS AAHRQQVSRY LNLLRQISPV PAAGVIIYLD LQQTVTV
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