| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1552 |
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| Symbol | |
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| ID | 3755991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1570769 |
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| End bp | 1572346 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637782429 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_388044 |
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| Protein GI | 78356595 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.246478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCA AGCTTGAACT TATTTTCAAA GACCGCGTGG GTGTTGTTTC CGACCTTTCT
TCATTGCTGG CCGGCCATGC ATTTTCCATT TCTTCCATGG AGGTGGAACG TAAGACTGAC
AAAGCCTTTG TATATATCGA GGCGGAAAAG TGGGACGAGG CCGTGGAGCG GGCGGCGCTT
TTTAAAGTGC TCAGCAGAAT TCCCGACCTG CTGGAATTCC GCATTGTGGA AACATTGCCC
GGTGAAGAAC GTGAAAAGCG TTTCAAGGTC GTGCTGGACA ATATCAGTGA CGGAGTGCTG
TCCATCGATG CTCGGGGCAG GGTGACAGCC ATCAATGCCG TTCTGCGTCA GGTTTACGGC
TGCGGCCCAG ATGCGGCGGG CAAGCCGCTT GCTTCTCTGG GACTGCCGGA TAACGGGCTT
CTGGAGTGCC TTGAGGGTAA GGAGCTGCTT AATGCCAAGC GTGAGATAGC CACCTCTGAC
GGGCGGGTAC AGTACTTTGT GACCCGCCGT CCCATACGCG ACTCCAATGA CCGCATTGTC
GGGGCTGTGG AACTGGCCCG CGATATGCGT GAAATCCGGC AGCTGGCCCG TTCCATAACC
GATCCGGAAC AGATCGGATT TGGCGATATT GTCGGCAGGG ATGCTGCCAT CGCTTTTGCC
ATCAGCTTTG CAGAGCAGGT TGCGGCAACA GACTCCATCA TTTCCATCCG CGGAGAAAGC
GGAACAGGCA AAGAGCTTTT TGCCCGTGCC ATTCATACAG CCAGCAGGCG CAGCGGACCT
TTTGTTCCTG TAAACTGTGC TGCACTGCCC GAGCAGCTGC TGGAAAGCGA GCTTTTCGGC
TATGAGCGCG GGGCGTTCAC AGGCGGCAGG CGCGAGGGCA AACAGGGGCT GTTTGAAGTG
GCCCGGGGCG GAACTCTTTT TCTGGACGAG ATAGGCGATA TGCCGCTTGC ATCGCAGGTG
AAAATCCTGC GCGTCATACA GGAAAGCAGA ATGCGCCGGC TGGGAGGTTC GCAGGAAGTG
GCGGTGGACA CGCGCATTAT AACCGCCACC AACAGAACTC TTGAGCGGCT GGTGGAAGAA
GGACGCTTCC GGCAGGATTT GTATTACCGC ATCAATGTGC TGCCTATCCA CATACCCCCG
CTAAAAGAGC GGCTGGACGA TATCCCGCTG CTGGTGGAGC ATTTTTTGCT GAATCTCGCG
GCGCGGCTGG ACAAGCCGGC GCGTTCGCTT ACCCCCGATG CGCTGGACAA GCTGCGCGCG
CATCATTGGC CGGGTAATGT CCGGGAGTTG AAAAACGTTG TGGAGCGTGC GGCCATATTG
TGTCAGGGGC AGATAGTGCG CCAGTCACAT ATACTTTTCA GCCATGAAAT TGAAGCCGGC
ATGTCGCGGC AGGCGTTACG GCAGGGGGCG CGTGTTGCCA GTACAGGACT GCGCGATGCT
GTGGCCGACT TTGAACGCGG TGTCATACGC GATGCTCTGA CAAGAACGCC GAGTATCCGC
AAGGCGGCGC AGGCTCTCGG GGTTTCTCAC TCCTCACTGC TGGCAAAAAT GCGCAAACTG
GGTGTCGGTT CGGTTTGA
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| Protein sequence | MKLKLELIFK DRVGVVSDLS SLLAGHAFSI SSMEVERKTD KAFVYIEAEK WDEAVERAAL
FKVLSRIPDL LEFRIVETLP GEEREKRFKV VLDNISDGVL SIDARGRVTA INAVLRQVYG
CGPDAAGKPL ASLGLPDNGL LECLEGKELL NAKREIATSD GRVQYFVTRR PIRDSNDRIV
GAVELARDMR EIRQLARSIT DPEQIGFGDI VGRDAAIAFA ISFAEQVAAT DSIISIRGES
GTGKELFARA IHTASRRSGP FVPVNCAALP EQLLESELFG YERGAFTGGR REGKQGLFEV
ARGGTLFLDE IGDMPLASQV KILRVIQESR MRRLGGSQEV AVDTRIITAT NRTLERLVEE
GRFRQDLYYR INVLPIHIPP LKERLDDIPL LVEHFLLNLA ARLDKPARSL TPDALDKLRA
HHWPGNVREL KNVVERAAIL CQGQIVRQSH ILFSHEIEAG MSRQALRQGA RVASTGLRDA
VADFERGVIR DALTRTPSIR KAAQALGVSH SSLLAKMRKL GVGSV
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