| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1498 |
|---|
| Symbol | panC |
|---|
| ID | 3756051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1518215 |
|---|
| End bp | 1519060 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637782376 |
|---|
| Product | pantoate--beta-alanine ligase |
|---|
| Protein accession | YP_387992 |
|---|
| Protein GI | 78356543 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0414] Panthothenate synthetase |
|---|
| TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00126611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATAA TCACATCTCC CGAAGAGCTT CAGCGGCTTT GCCTTGACTG GCGCTGCGGC
GGTGTCAAAA CCGCGCTGGT TCCGACCATG GGTTACTACC ATGCAGGGCA CGAAAGCCTT
ATGGCCTATG CCCGCGAACG TGCGGACAAG GTTGTGGTGA GCCTTTTTGT CAACCCCGCG
CAGTTTGCTC CCGGAGAAGA TCTGGCAGCC TACCCCCGCG ACCTTTCCGG CGATGCCGAG
GTTGCCCAGC GGGCCGGTGC CGATGTGCTG TTCACCCCGC AGCCGGAAGC CATGTACCCG
CAGGGATTCG ACACATGGGT GGAAATTCCC GGACTGTCTT CCGGCCTGTG CGGCGCCGAC
CGTCCCGGTC ATTTCCGCGG GGTGTGCACC GTGGTCATGA AGCTGATGCT GCTCACCCTG
CCCCGTCTTG CCGTTTTCGG CGAAAAAGAC TGGCAGCAGC TGGCAGTGCT CAGACGCATG
GCAAAAGACA TGCATCTGCC CGTAACCATA GACGGTTGCC CCATTGTACG CGAAACAGAC
GGTCTGGCCA TGAGTTCACG CAATGTGTAT CTGACTCCGG AAGAGCGCAG ACAGGCACCT
GCCCTGTACC AGGGGCTGAT CCGTGCACGC GACATGGTGG CCGGCGGAGA GCGCGACACG
GCCGTTCTGC GGGCTGCGGT TAAAGAATAC TGGAAGCAGC ACCTGCCGGA AGGCAGGGAA
GATTATCTGG AAATCGTTCA CCCCGACACG CTGCAGCCGC TGGAACGTGT GGGGGGCATG
GCCACATGCG CAGCCGCCGT ACGTCTGGGC AGAGCACGCC TGATTGACAA TCTGGCTCTG
ATATGA
|
|---|
| Protein sequence | MQIITSPEEL QRLCLDWRCG GVKTALVPTM GYYHAGHESL MAYARERADK VVVSLFVNPA
QFAPGEDLAA YPRDLSGDAE VAQRAGADVL FTPQPEAMYP QGFDTWVEIP GLSSGLCGAD
RPGHFRGVCT VVMKLMLLTL PRLAVFGEKD WQQLAVLRRM AKDMHLPVTI DGCPIVRETD
GLAMSSRNVY LTPEERRQAP ALYQGLIRAR DMVAGGERDT AVLRAAVKEY WKQHLPEGRE
DYLEIVHPDT LQPLERVGGM ATCAAAVRLG RARLIDNLAL I
|
|---|
| |