| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1486 |
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| Symbol | |
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| ID | 3756078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1506245 |
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| End bp | 1508179 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637782364 |
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| Product | glycosyl transferase, group 2 family protein |
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| Protein accession | YP_387980 |
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| Protein GI | 78356531 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0093458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGTGC CGCCGGCCGC TTCCATGGCA TTCCAGTCAA AAAGCACAGC GCCTCCTTTT
CTCCAGACCG GAGTTGACAT ACTATACAAA GGGTTACAAG ATGATCAGAT ACAGTGCGCA
CGTCTTTTGC GCAATCATTT TAGCCGCGCG GTGCAGCCCC GTCCACCGTG TTACACCGCT
TCTGCGCGCG TACTGCGCAT ACTCTGCAAT ATGATGAATG ATCACCGCAC CGACACGTTG
CTCCGGCTGT GCGAAACAAT GCCGCTGTGG CAGCTGGGAG TCGAAGGACT GAACATACGC
CTGATGCATG CGGAACAGGG GCTGCGGACA CTGACCGCAG CGGCGCCCGA CGCCCTGCCC
GTCACGGTGT CCGGCGCTGT TGCCGCCCAC ATTCTGTGGT CATGGCAGAA GCATCCCCTC
GACCGCCGTC TGTGCGGCTA TGTGACAGCG CTCTTTGCAG GACACCCGTC CCACGACCGG
ACGGTTGCAC TGGCACACGC CGTGCTGCAG CGCAGTGCAG TCCCCCCGGA ATATGAGACA
TGGCGCGCTC TGGCAGATGC CGATCCGCAA GGCGCAATGC TCCGGTGCAT CAACCATATC
GCGGACGAAA AACATGCATG TTTCTGGCTG GGGCAGGCCT TTGAGCTCTG CCTTGCGCAG
CCGCATGACG GCTTGTGGGA GAAAGCAGCG CAGGCACTGC CCGTCTTTGC CGGAGCGGAC
ATACTGGCGG CCCGCCTGCA GGCCGAATAC CGGGTGTGCA TGCTGGAACA GAACCACGCG
GAACATGCGG ACAAAGTCCG CAGTCTGCTG CGCCGGCTGG AAAAAGAAGC CGGACCGCTT
TTCGGCCTGT GGGTAGCAGA AATGCAGGTT GAAACCGCAT TGAAGTGTGC CGATACCCGT
GCGGCGCACA GTGTGCTGCA AGCGCTCTGG CGGCAGCACC CGTGGCATCC GTCCCTCACT
CAGGGGCTGT ACAGCCTTAT GCACCCCGCG CCACTGCAGC ACCGGACCGT GCGTGACAAT
CCGCCTGCCA TCCTGCTGTA TTCATGGAAC AAGCCCGGAC TGCTGCGGCG CACGCTGCAA
ACCCTGCGTG ATTCGGACAT GGGCAACGCC CCCGTATTTG TGCTCGACAA CGGCTCTGAC
CGGCGCCCCG CCGCAGAGAC TGCGGAAGAT ATGCAGACCA TGCTGGAAAC CATGCGCGGT
CAATGGCCCG CGCAGCAGCT GCACACACTG CGTCTGCCCG TGAACATAGG GGCCCCTGCC
GCCCGCAACT GGCTGCTCTC ACTGCCGCAG GTACGCCGGC ATCAATGGGC CGTGTTTCTG
GACGATGACA TTCTGCTGCC GCCGCAATGG CTTGTTCCGC TCATGAGCGC GGCACTGGAG
AATCCGCGCA CGGCCACGGC CGGATGTACG GTACTCGACC ACACCCCGCC CTATGCCGTG
CAATGCGCCG ATTTTTTCCT CATCCCGCCG GATATGGGCA CCCGCAGTTT TTCCGACATT
GAAGAACAGA TGCATGTATA CTGCAATGCG GCCGGAAGCC GGTCGGTGCT GGCAGGCATG
CACACCCGCC CGTGCCTTTC CGTTTCCGGC TGCTGTCATG CACTGAACAT GCGTGCTGTT
GAAGAATGCG GTCCGTTCGA CATCCGCTTT TCTCCGACAC AGTTTGACGA CCTTGAACGC
GATATCCGAT GTGCACAGGC CGGTTTCGCC ACGGTGTACA CAGGCAGCGT GCGCATTCCG
CACATGCAGC ATTCCAGCAT GCGGCAGGCC GGTGCTCCGG CCAAGCTGGG GCATATCATG
GGCAATAAAA TAAAACTGGA ACACCTGTAT CCCGCCGGTT CCGTACAGGC CGTACGCGAA
CAGGCGCTGG AAACGGCACG CAGCGACCTG CTGCGCAAGC ACTCCACCCT ATGCAGAGAT
ATTCCCGCAA CATGA
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| Protein sequence | MSVPPAASMA FQSKSTAPPF LQTGVDILYK GLQDDQIQCA RLLRNHFSRA VQPRPPCYTA
SARVLRILCN MMNDHRTDTL LRLCETMPLW QLGVEGLNIR LMHAEQGLRT LTAAAPDALP
VTVSGAVAAH ILWSWQKHPL DRRLCGYVTA LFAGHPSHDR TVALAHAVLQ RSAVPPEYET
WRALADADPQ GAMLRCINHI ADEKHACFWL GQAFELCLAQ PHDGLWEKAA QALPVFAGAD
ILAARLQAEY RVCMLEQNHA EHADKVRSLL RRLEKEAGPL FGLWVAEMQV ETALKCADTR
AAHSVLQALW RQHPWHPSLT QGLYSLMHPA PLQHRTVRDN PPAILLYSWN KPGLLRRTLQ
TLRDSDMGNA PVFVLDNGSD RRPAAETAED MQTMLETMRG QWPAQQLHTL RLPVNIGAPA
ARNWLLSLPQ VRRHQWAVFL DDDILLPPQW LVPLMSAALE NPRTATAGCT VLDHTPPYAV
QCADFFLIPP DMGTRSFSDI EEQMHVYCNA AGSRSVLAGM HTRPCLSVSG CCHALNMRAV
EECGPFDIRF SPTQFDDLER DIRCAQAGFA TVYTGSVRIP HMQHSSMRQA GAPAKLGHIM
GNKIKLEHLY PAGSVQAVRE QALETARSDL LRKHSTLCRD IPAT
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