| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1423 |
|---|
| Symbol | |
|---|
| ID | 3756132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1448023 |
|---|
| End bp | 1448787 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637782301 |
|---|
| Product | putative polar amino acid transport system substrate-binding proetin |
|---|
| Protein accession | YP_387917 |
|---|
| Protein GI | 78356468 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0156729 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCACC GATTGCTGTT CATCTGCTGC CTGCTTGCAG CAGGCGTCTG CCTGATCTCT
TCACCGGCCG CATCGCGGCC CGTGGCGGAA CTGGCAACAC TGGAATGGCC TCCGTACTCC
GGCAGCTATC TGGACAGACA AGGCTATGCC AGCGAAGTAG TACGTCAGGC TTTCGCCGCA
TCGGGCATGG ACACCCGCCT GCATTTTTTC CCCTGGGAAC GGGCCATCCG CAGCATGAAA
CATTATGGAT ATTCCGGATA TACGCCGGAA TATTACTCCG AAACCCGGCG TGACTGTCTT
TTTTCCGCCC CGTTTCCCGC CGGCCCGCTG TTTCTTTTCC AGCTGCGGGG CAGAAACCTG
CACTACACCA GTCTCGACGA CCTGCGCGGA CTGCGCATAG GAACTGTCTC AGGCTATGTA
AACACAGACG TCTTCGACAG CGCAGAGTTT CTGCTCAAAG ATCCCGCGGT GGATGATGTA
TCAAACCTGC GCAAACTGCT TGCAGGCAGG GTGGATGTCA TTGTCGGCGA CGCTCTGACC
CTGCGCTTTC TGCTCACCCG CGAGCTTGGT CTGCCCGCCG GCACCATAGA GCCTCTTGAG
CCTCCGCTGG ATAACAAATC GCTGCATGTC TGCTTCAACC CGCAGCATCC GGCTGCAGGC
GACTATATAA GCGCTTTTAA CAAGGGGCTG GAGCAGATGC GGCACAACGG CACCCTGAAA
GCGCTGCACA GCAGGCTGTA CGACGCATAT ATGCCGGGCA TGTGA
|
|---|
| Protein sequence | MLHRLLFICC LLAAGVCLIS SPAASRPVAE LATLEWPPYS GSYLDRQGYA SEVVRQAFAA
SGMDTRLHFF PWERAIRSMK HYGYSGYTPE YYSETRRDCL FSAPFPAGPL FLFQLRGRNL
HYTSLDDLRG LRIGTVSGYV NTDVFDSAEF LLKDPAVDDV SNLRKLLAGR VDVIVGDALT
LRFLLTRELG LPAGTIEPLE PPLDNKSLHV CFNPQHPAAG DYISAFNKGL EQMRHNGTLK
ALHSRLYDAY MPGM
|
|---|
| |