Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1337 |
Symbol | |
ID | 3756196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1355665 |
End bp | 1357260 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637782215 |
Product | sodium/proline symporter (proline permease) |
Protein accession | YP_387833 |
Protein GI | 78356384 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGGTA AACTTATTGC CACCGCCGTA TATCTGGGTT GCTGTTTCTG GCTTTCCTGG AAGGCTTGGA AAGAAACAGG AAGCAATGCC GACTACATGC TGGCCGGCAG ACAGGCCGGG CCTTTTGTCA TGGCCATGTC TTACGGAGCC ACATTCATTT CCACGTCGGC CATCATCGGT TTCGGCGGGG CCGCGGCCAT GTTCGGTTTT TCCGTACTGT GGCTCACGGT GCTCAACATC GGTGTGGGCG TTTTCATTGC CATGGTGTTT TTCGGCAGAC GCACCCGCCG CATGGGGCTG GCTCTCGATT CGCACACGTT TCCGGAACTG CTGGGCAGAC GATATGACTC GCGTTTCATT CAGGGGTTTT CCGGCAGCAT CATTTTTCTG TTCATTCCGG TTTACGCCGC AGCAGTTCTC ATCGGCATTG CGCGGCTGGC CGAAGTGTCG CTGGGTGTGC CTTATGTGGC GGCACTGCTC AGCGTCACGG CCATTCTGGC ACTGTATGTC ATCACCGGCG GCATCAAGGC CGTCATGTAC ACCGACGCAT TTCAAGGCAC ACTTATGGTG CTTATGATGC TGATGCTTGT GGGCTATACC TACTGGATGC TGGGCGGCGT CATTCCCGCG CACGAAACCC TTTCGGACAT GGCGCCGCTG ATGCCCGAGA AACTGCGCGC CGGCGGCATG CTGGGGTGGA CACAGGGCAC CGTGACCGGC TCGCCCCTGT GGCTGGTCAT CTACACCACC ATCGTTTACG GCGTGGGCGT GGGGGTACTG GCGCAACCGC AGCTTGCCGT GCGCTACATG ACTGTGCCCT CGGACAGAGA ACTGCACAGG GCCGTACTGT TCGGCGGAGT GTTCATTCTG CTGATGACCG GCGTGGCTTT CACGGTCGGC GCACTTTCCA ACGCGGTGTT TTTTCAGAAA TTCGGTAAAA TTGCCATACA GATGGGCGGC GGAAATGTGG ACAAGATAAT TCCCGCCTAT GTGGAAACCA TGATGCCCGG CTGGTTTTCA GGATTTTTTC TGCTGGCCAT GATGGCCGCC GCCATGTCCA CCATGTCGGG GCAATATCAT ACCGGCGGCA CGGCGCTGGG GCACGACATC ATCACACGCA CTCTGGGCAG AAAGCAGCAG GGGCTTGCCG CCAACCGCAT CGGTGTGGTC ATAACCATAC TTGCCTCGCT GGTCTGGGCA TGGGTACTGC CCGGCTCTGT CATTGCCAGA GCCACCGCTT TTTTCTTCGG GCTGTGCGCA GCCACTTTTC TGCCTGCCTA TTCTCTGGGG CTTTACTGGC GCGGCATGAC CAAAACCGGC GCCAAGGTGT CCATGCTGGG CGGATTCGCA GCATCCATGT TCTGGCTGCT GTTCATCCAT GAAAAAGAAG CCGCAGCCAT CGGGCTGTGC CGCTGGCTGA CCGGCAAAGC CACTCTGGTT GCCGACGCAG TGCCCGGTTC GGCACTGCAT CTGCTGCAGT GGGTAGACCC CAATGTGGTG GCGCTGCCGC TGTCGTTTCT GCTGGCGGCG GGCGTCAGTA CGGCTACCCG TCCGGTGGCA CGGGAACATC TGGACCTGTG TTACAGCAGG TGCTGA
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Protein sequence | MTGKLIATAV YLGCCFWLSW KAWKETGSNA DYMLAGRQAG PFVMAMSYGA TFISTSAIIG FGGAAAMFGF SVLWLTVLNI GVGVFIAMVF FGRRTRRMGL ALDSHTFPEL LGRRYDSRFI QGFSGSIIFL FIPVYAAAVL IGIARLAEVS LGVPYVAALL SVTAILALYV ITGGIKAVMY TDAFQGTLMV LMMLMLVGYT YWMLGGVIPA HETLSDMAPL MPEKLRAGGM LGWTQGTVTG SPLWLVIYTT IVYGVGVGVL AQPQLAVRYM TVPSDRELHR AVLFGGVFIL LMTGVAFTVG ALSNAVFFQK FGKIAIQMGG GNVDKIIPAY VETMMPGWFS GFFLLAMMAA AMSTMSGQYH TGGTALGHDI ITRTLGRKQQ GLAANRIGVV ITILASLVWA WVLPGSVIAR ATAFFFGLCA ATFLPAYSLG LYWRGMTKTG AKVSMLGGFA ASMFWLLFIH EKEAAAIGLC RWLTGKATLV ADAVPGSALH LLQWVDPNVV ALPLSFLLAA GVSTATRPVA REHLDLCYSR C
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