| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1318 |
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| Symbol | |
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| ID | 3756216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1336747 |
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| End bp | 1339164 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637782196 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_387814 |
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| Protein GI | 78356365 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000791242 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAAA TACTTATTAT TGCAGAAAAA CCATCCGTAG CGCGGGAAAT TGCACCGCTG
GTCGGTGCCG TTTCCAGACG TGACGGCTTT CTGGAAGGCC CGACGCATAT CGTCAGCTGG
GCGGTGGGGC ATCTGGTTAA CATAGCCGAG CCGGAAGAAC AGGACGAAGC ATGGGGCGGA
CGCTGGGCGC TGGAACAGCT GCCCATGATT CCCCGGCAGT TTCGACTGAC CGTGCTGCCC
GAAGCCCGCA GACAGTATGA AACCGTGCGG CAGCTCATGC ATCGCGATGA TGTGGCGCAT
GTGGTTAACG CCACCGACGC CGGACGGGAG GGTGAACTTA TTTTCCGGCG CATCCAGCTG
CACGCCGGCT GCACAAAGCC TGTGCAGCGC ATGTGGGCCA ACGATATGAC GGAAGAAGGG
CTGCGCCGCA GTCTGGGCAA TCTGCTGGAG GATGCCGCCA AGCGTAATCT GGGGCTTGCG
GCCTTTGCAC GGGCCGAGGC GGACTGGCTT ATCGGTATGA ATCTTTCGCG CCTGTTCACG
CTGAAGGCCG GTTCACTTAT TTCTGTCGGC CGTGTGCAGA CGCCGGTGCT CAAGCTTATC
TGTGACCGGC GTGCGGAAAT AGAACATTTT GTTCCTTCTG ATTTCTGGAC GGTGGAGGCC
CGTTTCGGCC GCAGCGCACC CTGTAATGCC GGTGGTGCCG CAGCTGCAGC CGGTTCCGCC
GCGCCGGTGT GTTTGTCTGC CGGGGCGGCG GACGCGCAAG GAGCGGAAAA ACACCCCCCG
CAGGCCGCTG CGGCAACTGC CGGTCAGGCA TCATGCCCGC CGGATGAGAA CGCGGATGCC
CGAGGCACGG GAACGGAGAC ACCGGCTGAT GATGTGTTCA GTGCCGTGTG GCACCTGCCG
CCCGACTTCA AGGAAACACG TCTGGAGCGG CAGGATGATG CCGAAGCAGT CATCGGTCGT
TGTCAGGGCG GTACAGGCGT GGTGGACGCC ACGGAAAACC GCAAGGGCTC TCAGAAACCT
CCGCTTCCCT TCGACCTGAC TACCCTGCAG CGCGAAGCGA ACTCGCGTTT CGGCTATTCA
GCCAAGGAAA CACTCGCCAT AGCGCAGGCT CTGTACGAAC AGCGCAAGCT CATCACTTAT
CCCAGAACTG ATTCGCGATA CCTTACCCGT GATTTGTTCA AGGAAATTTT AAAGCATTTC
AGAGCGGTAT ATCATCTGTA CCCGCAGGAG ACGGTTCCGG CAGTGGAGCG TGTCAAAGCG
GGGTGCAAGT TTGACTGTGT CAATGACAAA AAAGTCACCG ATCACCACGC CATCATTCCC
ACAGCTGCCA AAGGCAGGCC TGATGCGCTT TCTGCCGAAG AACGTAATGT TTACGACATG
GTCTGCCGCC GTTTTGTGGC CGCGTTCAGC GCTCCGGCCA GTTTCATGTC ATCCACGGTA
CGGGTGCTCT CCGGTGAAGA TGTTTTTGTA GCGCGGGGAA AAGTATTCAA GGATATCGGC
TGGCTGGCTG TGGAACCGTG GCGCACGGCC GAGGACAACC CGTTGCCCGC ACTGCGCAAG
GGGACACGGC TGCATGTGCA TGAAGTTTCG GCTGTCAGAC GGCAGACAAA AGCTCCGGCG
CATTTTACCG ATGCTTCGCT GCTTGCCGCC ATGGAAACCG CGGGGCGGCT GGTGGATGAC
GAAGAGCTGC GCAATGCCAT GAAGGAGCGC GGGCTGGGCA CTCCGGCCAC AAGGGCACAG
ATTATTGAAA CCCTGCTGGC GCGGGGGTAT GTGGAAAAGA AAGGCAAAAG GCTGATTGCC
ACCGATTCCG GCATGCAGGC CGCGGCGCTG GTCTCTTCCA TGCTGCCTGA TATGGCCTCG
GCGGAACTGA CTGGTCTCTG GGAAAAAAAG CTCAAAGATA TCGAAGCGGG AAATAATACA
TACCCTTTGT TCATGCAGGA AATCAGAACC ATGCTGGCGC AGAGTGTCGA AAGCATAAAG
CCCCGCAATG TCAAAAACAT ACTGGTAGAA ACCGCTGCGC GTCTGGCCTC GCGCGAGCTG
GACGGTAAAT GTCCGTTGTG CGGGGCAGAG GTGGAAGAGC GGGACAAAGG GTTCGGGTGC
AGCCGCTGGA AACGCGCTGA CGGCGGGTGT CCCTTTATGA TCTGGCGGAC ATTTATGGGT
ACGCAGATTG ATGCGGGTAT GGTACGCGAG CTGCTGGAGA CGGGCTGCAC CAGTCAGGAA
CTGCAGCTTA CTTCCCGCGG CGGCAATACT TTTTCGGCAC GGCTCAGACT GGAGCAGGGA
AGAGTGCGCC CCGACCTGCC GGAAAAACAT GCCCGTGCGT CCGGCGGCGC TGCACCGTCT
GCCGGTGTGG ACATGCACGA CCCTGCCGAA AATCCTTTTT TCGCGGATGA AAATCCGTTT
CCGCCGGAAA TGCCCTGA
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| Protein sequence | MSKILIIAEK PSVAREIAPL VGAVSRRDGF LEGPTHIVSW AVGHLVNIAE PEEQDEAWGG
RWALEQLPMI PRQFRLTVLP EARRQYETVR QLMHRDDVAH VVNATDAGRE GELIFRRIQL
HAGCTKPVQR MWANDMTEEG LRRSLGNLLE DAAKRNLGLA AFARAEADWL IGMNLSRLFT
LKAGSLISVG RVQTPVLKLI CDRRAEIEHF VPSDFWTVEA RFGRSAPCNA GGAAAAAGSA
APVCLSAGAA DAQGAEKHPP QAAAATAGQA SCPPDENADA RGTGTETPAD DVFSAVWHLP
PDFKETRLER QDDAEAVIGR CQGGTGVVDA TENRKGSQKP PLPFDLTTLQ REANSRFGYS
AKETLAIAQA LYEQRKLITY PRTDSRYLTR DLFKEILKHF RAVYHLYPQE TVPAVERVKA
GCKFDCVNDK KVTDHHAIIP TAAKGRPDAL SAEERNVYDM VCRRFVAAFS APASFMSSTV
RVLSGEDVFV ARGKVFKDIG WLAVEPWRTA EDNPLPALRK GTRLHVHEVS AVRRQTKAPA
HFTDASLLAA METAGRLVDD EELRNAMKER GLGTPATRAQ IIETLLARGY VEKKGKRLIA
TDSGMQAAAL VSSMLPDMAS AELTGLWEKK LKDIEAGNNT YPLFMQEIRT MLAQSVESIK
PRNVKNILVE TAARLASREL DGKCPLCGAE VEERDKGFGC SRWKRADGGC PFMIWRTFMG
TQIDAGMVRE LLETGCTSQE LQLTSRGGNT FSARLRLEQG RVRPDLPEKH ARASGGAAPS
AGVDMHDPAE NPFFADENPF PPEMP
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