Gene Dde_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1215 
Symbol 
ID3755391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1241709 
End bp1242491 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID637782085 
ProductHNH nuclease 
Protein accessionYP_387711 
Protein GI78356262 
COG category[V] Defense mechanisms 
COG ID[COG3183] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCGCC GCACCGCCGC AATCTTGCTG CGGTTCTGCG CGGCGCGCTT TTTGTCAGAT 
GAACGACGCC CCGCGGCATT ATACCGCGGG GCGTTTTTAT GCATATGCCC CATGCGGCCG
CCGCGGATGC ATCACTGCCG GCCGTGGCCG TCAAATCCGG AGAAGAATAG TATGAAACAG
GCCATACTGC AGGCCATTGA TGACTTTGCA CGCGGGGTGC GCCCTGCGTT TTATAAAACG
CCCAGACGCT GGTATCTGGT ACATCGGGGC AGCCTGTATC CGGCCAAGGC CATATGGGCC
ATGGCCACGG GACAAGGTAG CGCGGGCAGC TTCAACACCC GTGACGCACG CGCCGGACTG
GCAGAGGCCG GTTTTGCTGT GCGGGCTTTT GAACCGGAAT CCGTGCAGTG GCCCGATGAA
GATGTGCGCC TTGCCATCAG GCAGCTGCAG CAGGCTGCGG ATACAGACCC CGGCGATGAT
GCGGCGGAAA CTCTTTGCCC GCCTGGCATG ACCGTGCGCG AACAGGCTGT CTTCCGGCGC
AGTCCCGTGG TCGCTGCCAG AGTGCTGCTG CGTGCCGGTG GCTTCTGCGA ATGCTGCGGG
GCCCCCGCAC CGTTTGTCAG CCGTGCAGAC AACCTGCCTT ATCTTGAGGT GCATCACGTC
CGGCCGCTGG CAGAGGGCGG CGCGGATACT CCGGCCAACT GCATGGCGCT GTGCCCCAAC
TGCCACAGGC AGTTTCATTA CGGCATCAAG CCGCCGGTAT GTGCATTATC ATCGTCGCGC
TGA
 
Protein sequence
MVRRTAAILL RFCAARFLSD ERRPAALYRG AFLCICPMRP PRMHHCRPWP SNPEKNSMKQ 
AILQAIDDFA RGVRPAFYKT PRRWYLVHRG SLYPAKAIWA MATGQGSAGS FNTRDARAGL
AEAGFAVRAF EPESVQWPDE DVRLAIRQLQ QAADTDPGDD AAETLCPPGM TVREQAVFRR
SPVVAARVLL RAGGFCECCG APAPFVSRAD NLPYLEVHHV RPLAEGGADT PANCMALCPN
CHRQFHYGIK PPVCALSSSR