Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1215 |
Symbol | |
ID | 3755391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 1241709 |
End bp | 1242491 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637782085 |
Product | HNH nuclease |
Protein accession | YP_387711 |
Protein GI | 78356262 |
COG category | [V] Defense mechanisms |
COG ID | [COG3183] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCGCC GCACCGCCGC AATCTTGCTG CGGTTCTGCG CGGCGCGCTT TTTGTCAGAT GAACGACGCC CCGCGGCATT ATACCGCGGG GCGTTTTTAT GCATATGCCC CATGCGGCCG CCGCGGATGC ATCACTGCCG GCCGTGGCCG TCAAATCCGG AGAAGAATAG TATGAAACAG GCCATACTGC AGGCCATTGA TGACTTTGCA CGCGGGGTGC GCCCTGCGTT TTATAAAACG CCCAGACGCT GGTATCTGGT ACATCGGGGC AGCCTGTATC CGGCCAAGGC CATATGGGCC ATGGCCACGG GACAAGGTAG CGCGGGCAGC TTCAACACCC GTGACGCACG CGCCGGACTG GCAGAGGCCG GTTTTGCTGT GCGGGCTTTT GAACCGGAAT CCGTGCAGTG GCCCGATGAA GATGTGCGCC TTGCCATCAG GCAGCTGCAG CAGGCTGCGG ATACAGACCC CGGCGATGAT GCGGCGGAAA CTCTTTGCCC GCCTGGCATG ACCGTGCGCG AACAGGCTGT CTTCCGGCGC AGTCCCGTGG TCGCTGCCAG AGTGCTGCTG CGTGCCGGTG GCTTCTGCGA ATGCTGCGGG GCCCCCGCAC CGTTTGTCAG CCGTGCAGAC AACCTGCCTT ATCTTGAGGT GCATCACGTC CGGCCGCTGG CAGAGGGCGG CGCGGATACT CCGGCCAACT GCATGGCGCT GTGCCCCAAC TGCCACAGGC AGTTTCATTA CGGCATCAAG CCGCCGGTAT GTGCATTATC ATCGTCGCGC TGA
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Protein sequence | MVRRTAAILL RFCAARFLSD ERRPAALYRG AFLCICPMRP PRMHHCRPWP SNPEKNSMKQ AILQAIDDFA RGVRPAFYKT PRRWYLVHRG SLYPAKAIWA MATGQGSAGS FNTRDARAGL AEAGFAVRAF EPESVQWPDE DVRLAIRQLQ QAADTDPGDD AAETLCPPGM TVREQAVFRR SPVVAARVLL RAGGFCECCG APAPFVSRAD NLPYLEVHHV RPLAEGGADT PANCMALCPN CHRQFHYGIK PPVCALSSSR
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