Gene Dde_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1186 
Symbol 
ID3755210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp1215977 
End bp1217068 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content59% 
IMG OID637782056 
ProductM20/M25/M40 family peptidase 
Protein accessionYP_387682 
Protein GI78356233 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000000390537 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTTCTA TGCAACACAT TGTCGAACTG ACAAGCGATC TCATCCGCTT TCCCAGCATG 
CACTCCAGAC CGGAGCAAAT CTCACGCTGT GCCGGTTTCA TCATGGACTG GTGCGCACAG 
AACGGCATTC ATGCCGAACG CATGGACCAC GACGGAATTC CCTCCGTTAT GGTGCTGCCC 
GAAAAAGGCA GGGCGGGGCT GCTGCTGATG GCCCACATAG ATGTGGTGGA CGCGGAGGAC 
GACCTGTTTG TTCCGCGTGT GGAAAATGAC AGATTGTACG GACGCGGCGC CAATGACGAC 
AAGTATGCCG TGGCGCTGGG ACTTGTCATG TTCAGAGACC GGCTGAACGC CCTGAAGGCC 
GCCGGACGCA GCCAGAAGGA CATGGCGCTG GGGCTGCTTA TCACCGGCGA CGAAGAAATA 
GGCGGCATGA ACGGCGCCGC CAAAGCCCTG CCGCTCATCA GGGCCGACTA TGTGGTGGCG 
CTGGACGGCG GTAATCCGCA GCAGGTCATC ACCAAAGAAA AAGGCATCAT CGACATAAAG 
CTGACCTGCA CGGGAAAGGC GGCCCATGGC GCCCGCCCGT GGATGGGAGT GAACGCCGTT 
GACCTGCTGA TGGAGGACTA TACGAGGCTG AAAACGCTGT TTGCCGAAGA AAATGAGGAC 
CACTGGCACC GCACGGTCAA TCTGGGCAGA ATACGGGCCG GAGAATCCAC CAACAAGGTG 
CCCGACGTGG CGGAAGGCTG GTTCAACATC CGCGTGACGG AACATGACGA TCCCGGAGCA 
CTGATTGACA AAATACGTAA AACAGTCTCG GGAACGGTCA GCATTGTGCG CACCGTGCCT 
GTTTTTCTGG CTGCAGACAG CCCCTACACA GAAAGACTGC TGGCGTTGTC CGGTGCAACG 
GCGGGCAAGG CCCACGGAGC AAGTGATGCC CGCTATCTGG GCGAAAACGG CCTCACGGGC 
GTTGTATGGG GTGCAGAAGG CTTTAACACC CTGCATTCAC GCGATGAGTG TCTGCACATT 
CCCAGTCTGC AGAGCATCTA CGACCCGCTG ATGCAGCTCG CCCGCGAAAT GGAGGAGCAT 
GCCGCAGTTT GA
 
Protein sequence
MSSMQHIVEL TSDLIRFPSM HSRPEQISRC AGFIMDWCAQ NGIHAERMDH DGIPSVMVLP 
EKGRAGLLLM AHIDVVDAED DLFVPRVEND RLYGRGANDD KYAVALGLVM FRDRLNALKA 
AGRSQKDMAL GLLITGDEEI GGMNGAAKAL PLIRADYVVA LDGGNPQQVI TKEKGIIDIK 
LTCTGKAAHG ARPWMGVNAV DLLMEDYTRL KTLFAEENED HWHRTVNLGR IRAGESTNKV 
PDVAEGWFNI RVTEHDDPGA LIDKIRKTVS GTVSIVRTVP VFLAADSPYT ERLLALSGAT 
AGKAHGASDA RYLGENGLTG VVWGAEGFNT LHSRDECLHI PSLQSIYDPL MQLAREMEEH 
AAV