Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1171 |
Symbol | |
ID | 3755195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1195051 |
End bp | 1197075 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637782041 |
Product | diguanylate cyclase |
Protein accession | YP_387667 |
Protein GI | 78356218 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTCC CGCGCTGCCG GCGTTTTTTT CTCACCCTTT CCGGGCTTGC CGCATGGGCC GTTCTGTGCC TGTGCACTAC GCTGCTGCAG GCGCAGCCTG TCCGGGCATC GGGCCTGCAG CCGGTTACGC TGCAACTGCA CTGGACGCAT GAATTCGAGT TTGCCGGTTT TTATGTTGCC AAAGAAAAAG GCTTTTATGC GGAACGCGGA CTGGATGTGA CCATAATACC CGGCGGGCCG GGCATAGTGC CGGTGCAGGA GGTGCTGCGC GGCAATGCCC AGTACGGCAT AGGTGCCGCC GAAGTGCTGC TGGCAAGGCT GCGCGGTGCA CCGCTGGTCA TGCTGGCCGC AGTGTTTCAG CACTCTGCCA GCTGTATTCT TACCCGGGCG GATTCCGGCA TCTACACCCC TCAGGACCTT GTGGGCAGAG TCTTTGAAAT GGGCAGGCTG GAAAGCGACG CCGAAACCTA TGCCATGCTG CATAACGAAG GCATCGACAT CAGCCAGCTG ACCCACGTGG ATTCGACATT CAATCCCCAG CTGCTGCTGG ACGGCAAGGT TGACGCCATT TCGGCATATT CTTTCAGCCA GCCTTTTTTT CTGCGCGAGC GGGGCATTCC CTACCGGCTC ATCCGGCCCA TCCAGTATGG TATCGATTTC TACGGCAATT CCATTTTTTC TTCAGAAAAC GAAGTGCGCA GGCACCCCGA ACGCACAGAG GCATTCATAG AAGCCAGCAT GAAAGGCTGG GCCTACGCCT TTGACCATGT GGACGAAGCC GTGGACATCA TTCTGAACAA ATACAGCGAT CACCCCTTTG CCCACTCGCG CGAGCATCTG CTGTTCGAAG CGGAAGAAAG CCGCAAACTG GTTATGCCGC ATCTGGTCGA TCTGGGGCAC ATGAATCCCG GCCGCTGGAA ACACATGGCC GACACGCTGG TACAGCTGGG GCTGGCTGAC GCCGATTATA CGCTGAAAGG CTTTCTTCAT GATCCTGATC TGTCGTCCAG CCTGCTCGCC CACTGGGGTG TGCGGGCCGG CATAGGCATT CTGGCGGGAG CCGTAGGACT GTGCCTTGTT CTGCTGCGCT TCAACCGCAG GCTTACCGCG GAAATCGCCT CACGCCGCAA AGCCGAGGAA CGGACGCTGA GAAGCGAACA ACGGCTTTCG CTGGCGTTGT GGGCGGGCAA TCTGGGCTGG TGGGACTGGG ACCTGAAATC CGACCATGTA TCGCTGGACA GAACAGCCCA CACCATGCTG GGCGGCAGCG ACACCCCGCT GCAGACGGCC CTGGAATCCA TGGCCGGCAA CCGCTCTCTT ACAGGTGCCA TGCCCTTTGT ACATACGCTG CGCAACATGC AGCAAAACGA CACCCGCACC TTTGAAGAAG AAATGCAGCT TGATACAGGC GGAAAAAAAC GCTGGGTGCT GTGCCGGGGA CAGATGATCA ACAGTTCCGG CCGCGCCGCC GGTGTTCTCA TGGACATCAG CAAACTGAAG TCATACCAGC AGGAACTGGA ACAGATGACC ATGACCGACT ATCTGACGGG ACTCTTCAAC CGCAGGCATT TCTTCCGTCA GCTGGAAACA CATCTGGAGC AGTACAAACG CAGGCAGTAC AATCTCTGCG TGGCGCTGCT AGACCTTGAC CACTTCAAGC GGATAAATGA CACATACGGA CACATGGCCG GCGACTCAGT CATCCGCGAG TTTGCCCTCC TGCTGAAGGA ATCGCTGAGG CCGTACGATG TCGTTGCCCG CTTCGGGGGC GAAGAATTCA TCATCCTGCT GCTGGACAGC GGACGGGAAG AAGCGCTGGG CATTCTGGAC AGGCTGCTGA AAAAGGTTTC GGGACACACC TTTGACGCCG AAGGACATCA TCTGAGGGTC ACCTTCAGCG GCGGAATTGC CGAAGCCGAC GAGCTGCCCG CCTCGGAACT GACCCCGAAG CGCATCGTGG CCGCCGCCGA CCAGCGGCTG TATCTGGCCA AAACAGCAGG CCGCAACACC ATCCGCATCC GCTAG
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Protein sequence | MTVPRCRRFF LTLSGLAAWA VLCLCTTLLQ AQPVRASGLQ PVTLQLHWTH EFEFAGFYVA KEKGFYAERG LDVTIIPGGP GIVPVQEVLR GNAQYGIGAA EVLLARLRGA PLVMLAAVFQ HSASCILTRA DSGIYTPQDL VGRVFEMGRL ESDAETYAML HNEGIDISQL THVDSTFNPQ LLLDGKVDAI SAYSFSQPFF LRERGIPYRL IRPIQYGIDF YGNSIFSSEN EVRRHPERTE AFIEASMKGW AYAFDHVDEA VDIILNKYSD HPFAHSREHL LFEAEESRKL VMPHLVDLGH MNPGRWKHMA DTLVQLGLAD ADYTLKGFLH DPDLSSSLLA HWGVRAGIGI LAGAVGLCLV LLRFNRRLTA EIASRRKAEE RTLRSEQRLS LALWAGNLGW WDWDLKSDHV SLDRTAHTML GGSDTPLQTA LESMAGNRSL TGAMPFVHTL RNMQQNDTRT FEEEMQLDTG GKKRWVLCRG QMINSSGRAA GVLMDISKLK SYQQELEQMT MTDYLTGLFN RRHFFRQLET HLEQYKRRQY NLCVALLDLD HFKRINDTYG HMAGDSVIRE FALLLKESLR PYDVVARFGG EEFIILLLDS GREEALGILD RLLKKVSGHT FDAEGHHLRV TFSGGIAEAD ELPASELTPK RIVAAADQRL YLAKTAGRNT IRIR
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