| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0965 |
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| Symbol | |
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| ID | 3755576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 989144 |
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| End bp | 992218 |
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| Gene Length | 3075 bp |
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| Protein Length | 1024 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637781832 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_387461 |
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| Protein GI | 78356012 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00708155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAC CGGAGATATC CGTCCGCAGG CCGGTCACGA CCGTTATGGT TTTCGCTGCC
ATTACATTGC TGGGTTGCGT GGCTTTTTTC AGGCTCAACC TCGACTTGTT GCCGGATATT
GAACCTCCGG CCGTGAGTGT CATCACACCC TATCCGGGGG CTTCCGCCAC GGATGTTGAG
TCGGAGGTGA CCAAGTACCT GGAAGACCAG CTTTCCACCA CACCGAATCT CGACCGGCTG
GAGTCAAAGT CCAAAGACAA CATCGCCATC GTCAATTGCA TATTCAACTG GGGCACCGAC
CTGGATGTTG CGGTCAACGA TATCCGGGAG AAGATCGATC TTGCCAAGCC GGACCTTGCC
GATGGAGCGG AAGACCCCTT TATCTTCAAG TTCAGCAGTT CCATGGTGCC GGTGCTCATC
ATGACGGTGA CGGCGGAAGA AAGCAGTCCC GATCTTTACA GAATTGTGGA CAAGCAGATC
GCCGATCCGT TGAAGCGTGT GCCCGGCGTG GGCGCTGTCG TCTATATCGG CGGTCAGGAA
AGACAGATCA ATGTGCATTT CGACCGCGAA GCAATAGATG CTTATCACAT TTCCGTCCAG
CAGATCAGAA ATGTTCTCGC CGCTGAAAAC CTGAACCTTC CGGTGGGCAC CGTCAAGATC
GGGAGGAATG AACTCCAGAT CAGAGTGGCG GGGCGCTATC GGGATGCAGC GGAAATCGCA
AATACGGTGA TCGGAAGCAA CGGCGACGCG CTTGTGCGGC TCAGAGACGT GGCCACGGTC
ACCGATGCCT TTGAGGAGCC GCAGGAGTGG GCGCGTTCCG GCAAGCTTCC TGCGATTGCC
TTGATTATTC AGAAGCAGTC CGGGACCAAC ACCGTCAACG TGATCGAAGC CATAAAAGAT
CGCCTCAAGA CACTGAAGAC CGAAGTGCCG GCGGATATCG AAATCCACGG GATTCTGGAT
AACTCAGATC ACATTTATGC GATGATCAAT AGTTTGACCG AAGCCGCCGT CGTCGGAGGC
CTTTTGGTCA TTGTCGTCTG TTTCCTGTTT CTCCGGCGGT TTCGCACCAG CCTGGTCGTC
TCAATGGCAA TTCCTTTTTC GATTATCGTC GCCTTTATCG GCCTCTTCGT CATGGATTAT
ACCATCAACG TCATTTCCAT GATGAGTCTT GCCATTGCTG TGGGAATGGT GGTGGACGAT
GCCATCGTCG TACTTGAAAA CATCGTGCGG CATGTGGACG ATGGCAAGCC TCCGCAGTTG
GCCGCCGTGG AGGGAACATC CGAAGTGGGT ATGGCGGTAG CCGCGTCAAC ATTGACCATT
GTAGCTGTCT TCGCCCCTCT TCTCTTAGTG AAAGGGATCG CCGGCATCAT CTTTGGTCAG
TTGGCGTTCA TGATCTTGAT TACGATTCTG GCCTCGCTTT TCATTTCATT GACGTTGACC
CCCATGGCTG CTTCCCGTTT GCTCCGTTCA CGGGATCAAA GAAAGCTCAA TCCGGTATTT
GTATGGAGCG AGCGTTTGCT GAATGGAATC GAAGCCGGTT ATTCTCACGT CCTGGGATGG
GGACTAAGGC ACCGTAACAT TTTGCTTTCA CTTATAGTTA TTGTATTTAT CGGCAGTCTG
GCACTGATTC CTTTGGTCGG TACGGAATTT TTCCCCGAAG TGGATTCGGG GGAAGTGGAG
GTGGTCCTGG AGATGGCGCA GGGCACCCGA GTGGAGGTCA CGGCCGGAAC CACGGAAGAA
ATGCTCAACG CGGTGAACGC CATTCCGGAA ATGGAAGCCT CCTATGCCCT GGCAGGTCAG
ACCAAGAAAG GATTTTTAAC AGCCCTCGGT TTTGAAGAGG GAACCGGCAT CGGTCGCATC
GGAGGGCGTC TCATTGATAA AAAAGAACGG AGTCGCCATG CCAAGGAGGT CGCTTCGGAG
CTTCGTGAGC AGGTCATAAA ACTGCCGGGC GTTGAGAATT TTTCCGCCAG CGCCGTAAGC
GTCATCCAAA AGGCGTTCCT GGGAGGCGGC CGGCCTATCA GCATCGATAT TCTGGGCCAT
GATATCGAGA CGACCGACAA AGCCGCCGCA AAGATCCAGC GCATCGTGGA AACCACACCC
GGCGCAGTGG ATGTCTCTGT CAGCAGAAAG AGACCACGGC CGGAAGTGCG GATTTGTCTT
GACCGGGATA AGGCGGCATC CCTGGGATTG AATGTGGCGC TTGTCGCCGA CGCATTGAGG
ACCAACTACT ATGGATTCGA TGATACGAAG TTCCGGGAGG CGGGTGACGA CTTCGACATC
GAGTTGCGAC TGAAAAAAGA CCAGCGGGAA ACGATTCGTG AAATCGGGGA AACCCCCATC
ACCACCCTGA CCGGTCAGAC CATTAAGCTC CGGAACGTCG CGTCTGTTCG GGAAACCTTT
GGGCCCGTGG AGATCGACCG GAAAAACAGG ACCCGCGTCA CAAAGGTTCA GGCGGGCGTC
CAGGGCAGGG TTCTGGGGGA TGTGGTACGG GATGTTCGAG AAAAGATGGC CTCTCTTGAC
CTGCCTCCCG GCGTTTCCAT CGAATGGGGC GGGGAGGTGG AGGAACAGCG AAAAGCGTTC
CGCGACCTGA CCCTCCTTTT GATTCTGGGA ATAGTCCTTG TCTACATGGT CATGGCAGGG
GAGTTCGAGG ATTTCGTTGA TCCATTCATC ATCATGTTTT CGGTTCCTTT CGCCTTCGCC
GGAGTGATAT GGGCCTTCGT TGCCACGGCC ACTCCGCTCA ACCTGATGAG CTTCATCGGG
GTAATCATGC TCATGGGCAT TGTTGTAAAG AACGCCATTG TGCTCGTGGA TTATACCAAG
CAACTGAGAG CAGGTGGGAT GACGCTAAAC GAAGCGGTGG TCACGGGCGG AAAAACACGC
CTGAGGCCGG TGCTCATGAC GAGTTTGACC ACCATATTCG GCATGGTCCC ATTAGCCCTT
TCCAGAGGGG AAGGCTCTGA AATATGGAAT GCACTGGGCA TCACGGTCAT TGGGGGACTG
TCGGTCAGCG GCCTTGTGAC ATTGATTCTG GTGCCGCTAA TGTATTCGCT GGTTCACCGG
GGTAAAGCAA AATGA
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| Protein sequence | MKLPEISVRR PVTTVMVFAA ITLLGCVAFF RLNLDLLPDI EPPAVSVITP YPGASATDVE
SEVTKYLEDQ LSTTPNLDRL ESKSKDNIAI VNCIFNWGTD LDVAVNDIRE KIDLAKPDLA
DGAEDPFIFK FSSSMVPVLI MTVTAEESSP DLYRIVDKQI ADPLKRVPGV GAVVYIGGQE
RQINVHFDRE AIDAYHISVQ QIRNVLAAEN LNLPVGTVKI GRNELQIRVA GRYRDAAEIA
NTVIGSNGDA LVRLRDVATV TDAFEEPQEW ARSGKLPAIA LIIQKQSGTN TVNVIEAIKD
RLKTLKTEVP ADIEIHGILD NSDHIYAMIN SLTEAAVVGG LLVIVVCFLF LRRFRTSLVV
SMAIPFSIIV AFIGLFVMDY TINVISMMSL AIAVGMVVDD AIVVLENIVR HVDDGKPPQL
AAVEGTSEVG MAVAASTLTI VAVFAPLLLV KGIAGIIFGQ LAFMILITIL ASLFISLTLT
PMAASRLLRS RDQRKLNPVF VWSERLLNGI EAGYSHVLGW GLRHRNILLS LIVIVFIGSL
ALIPLVGTEF FPEVDSGEVE VVLEMAQGTR VEVTAGTTEE MLNAVNAIPE MEASYALAGQ
TKKGFLTALG FEEGTGIGRI GGRLIDKKER SRHAKEVASE LREQVIKLPG VENFSASAVS
VIQKAFLGGG RPISIDILGH DIETTDKAAA KIQRIVETTP GAVDVSVSRK RPRPEVRICL
DRDKAASLGL NVALVADALR TNYYGFDDTK FREAGDDFDI ELRLKKDQRE TIREIGETPI
TTLTGQTIKL RNVASVRETF GPVEIDRKNR TRVTKVQAGV QGRVLGDVVR DVREKMASLD
LPPGVSIEWG GEVEEQRKAF RDLTLLLILG IVLVYMVMAG EFEDFVDPFI IMFSVPFAFA
GVIWAFVATA TPLNLMSFIG VIMLMGIVVK NAIVLVDYTK QLRAGGMTLN EAVVTGGKTR
LRPVLMTSLT TIFGMVPLAL SRGEGSEIWN ALGITVIGGL SVSGLVTLIL VPLMYSLVHR
GKAK
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