| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0938 |
|---|
| Symbol | |
|---|
| ID | 3755588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 964620 |
|---|
| End bp | 965903 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637781805 |
|---|
| Product | Phage protein D-like |
|---|
| Protein accession | YP_387434 |
|---|
| Protein GI | 78355985 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3500] Phage protein D |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0367858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGG ATACCTTCAA GCCGACATTT CTGATTCAGA TTGAGGGGCA AGACCTCTCG
AAGGACATCA CCCAGGAGAT CACCTCGTTT GTATTCACCG ACAACGAGGA GGAGCTGGAT
GTCCTCGAAC TGTCGGTGAC CGACCGCAAT CTGCAGTTCG TCGACGATCC GCTGTTCCAG
GAAGGCAACG AGATCGTGGC CCGCTTCGGC TACGTGGGGA ACCTCTCTCC GCGCAAGAAG
GCGGTCATCA AGGACATCGA TTACGACTTC CCGGAAAACG GCGATCCGAC CATCCGCATC
AAGGCCTACG ACAAGGGCTT CAAACTCGCG GGCAAGGAGA ACCAGAAAGT CTGGCAGAAA
CCCGCTCCCG GCATCCTCTA TTCGGAAATC GCCGAACAAG TCGCCGCCGC CAATGGCCTC
ACCCCGGTGG TCACGGCCAC CAAGGGAACC CATCTCCGCG TCACCCAGAG CAACATCTCG
GACGCCCAGT TTCTCAAGGA GTTGGCGGAA AAGGCCCGCG ACCGCGATGG CGACGGTGTG
AGCGGCTATG TCTTCTACAT CCAGGACGAC GAACTCCATT TCCATCCCCG CGAGCTCGAC
CAGACGCCGC TTCTGACCCT CGAATATTTC ACCGACACCA AGGGCCTGCT GCGCTCGTTC
CGCCCCAGCA CCCAATCCCA GGGGGCCAAG GGCGCGGGTG TCGAGACCAA GACGGTCGGC
GTCGACCCGC GCAAGAAGGA CGTGGTCGAG CACAAGGCAA ACAACGCCAC CACCCCCGAG
CGGACGGCCC TGGGCAAGCA GACCTATCTG GTCGACGGCA ACACCGGCGA AGGCAGCTTC
AAGGAACAGG AGACGGGGCA GATCGTGCCC AGCTTCGACC GTTCCGAAGG CTTTCACGAA
GAGCCGCGCC AGGAGCCCGC CCAGGACAGC GCCGAAGGCA AATTCCGCGA GGCCGAGCTG
CGCCAGGTCG AGGCGGATGC GGCCACCATC GGTATTCCCC AGCTACGCGC CAAGAAGAAC
GTCGAGATCA AGGGCGTGGG ACGGAAGTTT TCCGGCATCT ACTACTGCCA CTCGGTGCGC
CACAGCAGCA GCGGCGCTGG CTATCTCTGC GAACTCAAAC TCAAGAAGAA CGCCCTCGGC
AAAGGCGCGG GTGACAAGTC CGCCGAGTCC CAGGGCAAAC CCAACGATAA GGAGGCCCCG
CCCACGCCGC AAAACGAGCC GCCAGCCATG GTGACCATCG ACGCGGACTC CGGCGCGGTC
ACACAAGGAG GCGGCAATGG GTGA
|
|---|
| Protein sequence | MDLDTFKPTF LIQIEGQDLS KDITQEITSF VFTDNEEELD VLELSVTDRN LQFVDDPLFQ
EGNEIVARFG YVGNLSPRKK AVIKDIDYDF PENGDPTIRI KAYDKGFKLA GKENQKVWQK
PAPGILYSEI AEQVAAANGL TPVVTATKGT HLRVTQSNIS DAQFLKELAE KARDRDGDGV
SGYVFYIQDD ELHFHPRELD QTPLLTLEYF TDTKGLLRSF RPSTQSQGAK GAGVETKTVG
VDPRKKDVVE HKANNATTPE RTALGKQTYL VDGNTGEGSF KEQETGQIVP SFDRSEGFHE
EPRQEPAQDS AEGKFREAEL RQVEADAATI GIPQLRAKKN VEIKGVGRKF SGIYYCHSVR
HSSSGAGYLC ELKLKKNALG KGAGDKSAES QGKPNDKEAP PTPQNEPPAM VTIDADSGAV
TQGGGNG
|
|---|
| |