| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0864 |
|---|
| Symbol | |
|---|
| ID | 3755664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 890546 |
|---|
| End bp | 892150 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637781729 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_387360 |
|---|
| Protein GI | 78355911 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGC TTAACATTCT GTCTGACCAA TGGCTGCCCG TTATCCTGGC TGACGGGAAG
CGCATACGTA TTGCCCCGTG GGAACTGACG GCAGACCCCC GACCTGTGGC TCTGGATATA
CCGCGGCCGG ATTTCGGCGG GGCCATGCTG GAGTTTCTGG TGGGCTGCAT GCAGACCATG
TGCCCCCCCC AAAGCCGAAA GGATTGGCGG AGCTGGCGGA AAACACCGCC TCAACCCCAA
ACTCTTCGAA CGGCAATGGA ACCGTTTATT CCACACTTCC ATCTGCTGGG TGAACGCCCT
CTCTTCATGC AGGATCTGAC GCTGAAGCAG GAAGAAGAAA ACGTCATGGG CGTGGCCGCC
CTGCTCATCG ATTCCCCCGG CGAAAACGCC ATCAAAAATG ATACAGATTT TTTCGTCAAA
CGAGGCCGGA TAGAGACTCT GTGTCCGGCC TGCGCCGCCA TGGCCCTGTA TACCATGCAG
GCATTTGCCC CCTCCGGTGG TGCGGGCTAC CGCACCTCGC TACGCGGGGG CGGCCCTCTT
TCCACGCTGG TCTTGGGCGA AACTCTCTGG GAAACCGTGT GGAACAACGT GCTGGTGGCA
GAGAGCACTG ACTGGCGCAT ACCCGACGGG CACGACCCTC TGGGCCGCAT ACTGCCGTGG
ACTGTCCCCA CCCGCGACAG CAAGAAAAAA GGCACGGCGA TTCTGCCGGC AACAGGACAC
AACCTGCTGC ACTTCTGGGC CATGCCGCGT CGTTTCCGCC TGCATCCCGA AAACCTCTCT
GACCCGGCAG CCTGCGATAT CTGCGGTACC CCCTCCACAA CAGTCATCCG ACAAATTGGA
GCCAAAAACT ACGGCAACAA CTACGAAGGG GCATGGCAGC ACCCGCTCAC ACCATATCGC
GAGCAAGGAA AAGGAAAACT CGCTCTGTCC GTCAAGGGAG CATCGGAATG CACAGCCTAT
CACCAATGGC TGGGCCTGCT TTACGGGCCT CTTGGTAGTA AAAACAAGAC GCTGGTGGCG
GCCCAGTGCA TACGCCAATT CCGCGAACTG CTGCCGGCTA GCGCCGTACG AGTGCGTGCT
TTCGGCTACG ACATGGATAA CATGAAAGCC CGGCAATGGT GCGAAGGCGA GATGCCCCTT
TACGCGCTGG ATCCTGCCGA AACGGCAATC CTGCAGAATG AAATTGAGCT ATGGCTCGAC
GCGGCAGACA AAACACGTTC CAACCTGATC AAAGCGCTCA AGCAAGCCCT GTTCGCAGAT
GGAGGTCGCA ACGCCAAGGC AGACCAGACA CTGCTCGCCA ATGCTTCGAC GGCATTCTGG
TCCCGCACGG AGTCGGCTTT CTACTCACTG GCAGCCCGCT TCGTAGAGTC GGTGCAACAG
CAGGACGACG CGCAGCAGAT TGCCCTTGCC AAAATGCTTC GCAATGAGTG GGCAAACAGA
ATTCTTGCCG CCACCGACGC CATTTTCTCG GAACAGGCGG CCAGCGGCGC ATTCGATGAA
AGACAGGCTC CGCGTATTTA CGGAGCTCTC AACCAGATGC GCCGGTTTAA CCGGGGCAAC
TGCAACAAGG TGTTGGCAAC TGGAAGTACA GGAGACGGCA AATGA
|
|---|
| Protein sequence | MKTLNILSDQ WLPVILADGK RIRIAPWELT ADPRPVALDI PRPDFGGAML EFLVGCMQTM
CPPQSRKDWR SWRKTPPQPQ TLRTAMEPFI PHFHLLGERP LFMQDLTLKQ EEENVMGVAA
LLIDSPGENA IKNDTDFFVK RGRIETLCPA CAAMALYTMQ AFAPSGGAGY RTSLRGGGPL
STLVLGETLW ETVWNNVLVA ESTDWRIPDG HDPLGRILPW TVPTRDSKKK GTAILPATGH
NLLHFWAMPR RFRLHPENLS DPAACDICGT PSTTVIRQIG AKNYGNNYEG AWQHPLTPYR
EQGKGKLALS VKGASECTAY HQWLGLLYGP LGSKNKTLVA AQCIRQFREL LPASAVRVRA
FGYDMDNMKA RQWCEGEMPL YALDPAETAI LQNEIELWLD AADKTRSNLI KALKQALFAD
GGRNAKADQT LLANASTAFW SRTESAFYSL AARFVESVQQ QDDAQQIALA KMLRNEWANR
ILAATDAIFS EQAASGAFDE RQAPRIYGAL NQMRRFNRGN CNKVLATGST GDGK
|
|---|
| |