| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0678 |
|---|
| Symbol | |
|---|
| ID | 3755865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 694001 |
|---|
| End bp | 695206 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637781542 |
|---|
| Product | rhodanese-like protein |
|---|
| Protein accession | YP_387174 |
|---|
| Protein GI | 78355725 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.622569 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTAA TCCGGTCTTT CCCCTTCTGC CGCACATCCA TGCGCCGCAG TCCGCACAAC
GTCCTTGCAC CGGCATATGT GCTGCTGGCC CTGTGCTGCC TGCACATGTC CGCCGCGGCA
CAACCGCCGT TGCCGCCTCA GCAGCCCGCA TTATCCGCTC ATGCTCCCGG CGCAGCACCG
GAAAACAACA CCACCCGCAC CGAACCTCAC TGGCACAAAA CCATGCGCCT GCAGGCCGCC
GAACACGGCT ACAGACTGCT TGATCTGGAC GCCGTGGACT CGCTGCCCGA AACCACACTG
CTGCTGGATG TGCGCCCCGA TTACGAATTT GCCGCAGGAC ATGTACCCGG TGCGGTCAAC
ATGGAATTCG ACCCCGGCGA CACGGATTCG CTTTCCGCGG AAAAAACCCT GCAGCTTCAG
CAGACGCTGG GGCCGGACAA AGAACGCATG GTTGTCATCT ACTGCCGCAG CTTCCGCTGC
CTGCGCAGCG GGGCGGCGGC AAAGGCCGCT GCGCGTCTTG GCTACACCAA TGTATGGCGT
GTGGTGGAAG GATACTTCGG CTGGCTGGAG CAGCACCGGC CCGACCACAG CGGCAGAGCG
GACGGCTGTT CGGACAGGCG CACGACACAG GCCCGCACCC TGCCCGACCA CGGTCTGGCC
ATACTGGGCG GTGATGCGGA CCGGCGTATT CTGGGATTGC CCGCCGGAGC ACATACGGTA
CGGCTGGAAG AGATTCCCTG CGATGTGCTG GTGGTTCTGT TTTTCAACAC ACACTGCACG
CAGTGCCGCG AGCAGATGCA GCAACTGGAA CATCTGGCCC GTACCGTGAA CAGCCGTGCG
GCAACACAAA GCCACCGGGC GGTGGCCTTT GCAGGTATCG GCGTGCGGGA ATCAAAACGT
ACTCTGGCAA GACTGCGCCG CAAACAGGTG CACGCTGTCC CGCTTTTCGC CGACCCCGAT
GCCTCGCTGT TTGCCGCTTC GGGCTTTGCG GGCATACCCG GCGCATGGGT CATAGGCCCC
GCCGGCGGCA AAGCAACGGA CAGCCCGCAG ACAGGCGGCA GAGCGGTGCT GCTTTCCGTG
GCAGGGGACA TTGCGCAAAA TCCGGAGTTC CGGAGTCTGA TTTTCCGGAT GACGAACGTA
CCCGCATGGG GTATAAGCGG GCCTCACACG CAGGAAGCGG CTGCCGCTGC AGAAAAGCCG
CGGTAG
|
|---|
| Protein sequence | MSVIRSFPFC RTSMRRSPHN VLAPAYVLLA LCCLHMSAAA QPPLPPQQPA LSAHAPGAAP
ENNTTRTEPH WHKTMRLQAA EHGYRLLDLD AVDSLPETTL LLDVRPDYEF AAGHVPGAVN
MEFDPGDTDS LSAEKTLQLQ QTLGPDKERM VVIYCRSFRC LRSGAAAKAA ARLGYTNVWR
VVEGYFGWLE QHRPDHSGRA DGCSDRRTTQ ARTLPDHGLA ILGGDADRRI LGLPAGAHTV
RLEEIPCDVL VVLFFNTHCT QCREQMQQLE HLARTVNSRA ATQSHRAVAF AGIGVRESKR
TLARLRRKQV HAVPLFADPD ASLFAASGFA GIPGAWVIGP AGGKATDSPQ TGGRAVLLSV
AGDIAQNPEF RSLIFRMTNV PAWGISGPHT QEAAAAAEKP R
|
|---|
| |