| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0630 |
|---|
| Symbol | |
|---|
| ID | 3755892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 650154 |
|---|
| End bp | 651929 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637781493 |
|---|
| Product | sodium:solute symporter family protein |
|---|
| Protein accession | YP_387126 |
|---|
| Protein GI | 78355677 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4147] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACCA CGGTATGGAC CTATATCATG GTGGGGATAA CTTTCAGCCT GTATCTCGGC
ATCGCCTGGG TTTCACGCGT GCGCGACACC AGAGGCTTTT ATGTGGCCGG AGGCGGTGTA
CCGCCGCTGG CCAACGGCAT GGCTACCGCG GCCGACTGGA TGAGCGCGGC ATCGTTCATG
GGCATGGCCG GAATCATCTC GTTTGCCGGT TACACCGGCT CCATCTATCT GATGGGCTGG
ACAGGCGGCT ATGTGCTGCT TGCGCTGCTG CTGGCGCCCT ATCTGCGTAA ATTCGGCAAA
TTCACCGTTC CCGACTTTGT GGGAGACCGC TATTATTCCG GTACCGCCCG CGTGGTGGCC
CTGTTGTGCG CCGTCTTTGT CTCGCTGACC TATGTGGCCG GACAGATGCG CGGCGTGGGC
ATTGTGTTCA GCCGCTTTCT GGAAGTGGAC GTGAACACCG GCGTCATCAT CGGCATGGCC
ATCGTGTTCT TTTATGCAGG CATCGGCGGC ATGAAAGGCA TAACATGGAC GCAGGTAGCA
CAGTATTCCG TGCTGATTGT GGCATTCATC ATTCCGGCCG CGGCCATTTC CAAAATGATC
ACAGGCACGG CCATACCGCA GCTCGGCTTC GGGTCGGCCA TCGCACACGG TCCCCATGCG
GGAAAATACC TGCTGGAAAC GCTGGACGCC ATAGGCCGCG ACCTCGGGTT TGCCGGGTAC
ACCGAAGCAT TCGGAGCGGG CGGACGCTCC ATGCAGGACG TCATAGCCAT CACCATGGCA
CTTATGGTGG GCACAGCCGG GCTGCCGCAT GTGATCATCC GCTTCTACAC CGTGCCCACG
GTACGCGGAG CGCGCCTTTC CGCAGTATAC GCCCTGCTGT TCATCGCCGT GCTGTACACC
ACGGCACCGG CCATTGCAGC CTTTGCACGG TACAATCTGG TGAATTCGCT CAACAACGTG
GCCTACACAC AGGCGCCGTC GTGGTTTGCC AACTGGGAAC GCACAGGGCT TGTGGCCTGG
CTGGACAAAA ACAACGACGG CATCATCCAG TACAGAAGCG GCAACGCCTT TGCCGGCAAG
CCGGATTTCA GCGCCCTGCA AGGCGCGCAC GGCCAGCGGC TGCTGCACAA CGCCGCACTG
GACGGCGAAA ACGAACTGTA TGTCGACCGC GACATCATTG TGCTGGCCAA TCCCGAAATA
GCAGGGCTGG CGCCGTGGGT CATCGCCCTT GTGGCTGCCG GCGCGCTGGC AGCGGCCCTC
TCCACGGCCT CCGGACTGCT GCTGGTCATC GCGTCAAGCA TTTCGCACGA CCTGTACTAC
CGGATGCTCG ACAGGCAGGC TTCGGAAAAA AAACGGCTGC TTGTAGGGCG TGTAATGATA
GGCGTGGCAG TGTGCATTGC CGGATATTTC GGCATGAATC CGCCGGGGTT TGTGGCGCAG
GTTGTGGCGC TGGCTTTCGG GCTTGCCGCG TCATCCTTCT TTCCCACTCT TGTACTCGGC
ATCTTCTGGA AACGCGCCAC CCGTGAAGGC GCCATAACAG GCATGGTCTG CGGCATCGGG
TTCACCATGT TCTACATAGT GCAGACCAAA TTCATGGGTG TATCGCCGTG GTTCTTCGGC
ATCAGCCCCG AAGGCATCGG CTGCATAGGA ATGCTTGTCA ACTTTGTGCT TACGGCAGCC
GTTTCGCTGG TCACCCCGCC GCCGCCGGCG GAAGTGCAGG AGATGGTGGA ATCCATCCGC
ATTCCCAGAG GCGCATCGGC GGCCATAGAC CACTGA
|
|---|
| Protein sequence | MSTTVWTYIM VGITFSLYLG IAWVSRVRDT RGFYVAGGGV PPLANGMATA ADWMSAASFM
GMAGIISFAG YTGSIYLMGW TGGYVLLALL LAPYLRKFGK FTVPDFVGDR YYSGTARVVA
LLCAVFVSLT YVAGQMRGVG IVFSRFLEVD VNTGVIIGMA IVFFYAGIGG MKGITWTQVA
QYSVLIVAFI IPAAAISKMI TGTAIPQLGF GSAIAHGPHA GKYLLETLDA IGRDLGFAGY
TEAFGAGGRS MQDVIAITMA LMVGTAGLPH VIIRFYTVPT VRGARLSAVY ALLFIAVLYT
TAPAIAAFAR YNLVNSLNNV AYTQAPSWFA NWERTGLVAW LDKNNDGIIQ YRSGNAFAGK
PDFSALQGAH GQRLLHNAAL DGENELYVDR DIIVLANPEI AGLAPWVIAL VAAGALAAAL
STASGLLLVI ASSISHDLYY RMLDRQASEK KRLLVGRVMI GVAVCIAGYF GMNPPGFVAQ
VVALAFGLAA SSFFPTLVLG IFWKRATREG AITGMVCGIG FTMFYIVQTK FMGVSPWFFG
ISPEGIGCIG MLVNFVLTAA VSLVTPPPPA EVQEMVESIR IPRGASAAID H
|
|---|
| |