| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0548 |
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| Symbol | |
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| ID | 3756495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 564647 |
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| End bp | 567946 |
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| Gene Length | 3300 bp |
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| Protein Length | 1099 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637781409 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_387044 |
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| Protein GI | 78355595 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCAGC ATGACGCCGC ACCGGCAGGA ATAATTCCCG CCATTGTCCG CACATTTGTC
ACCGGCAAAA ATGCTCTGCT GCTGCTCATT TTCGGTCTCG GGCTGGGCAT GGCCGCGCTG
CTGCTCACGC CCAGAGAAGA AGAGCCGCAA ATCATCGTGC CCATGGCGGA CATACTGGTG
CAGGTGCCCG GCGCATCTGC GGCAGAAGTG GAAAAACTGG TGGCCACCCC GCTGGAACGG
CTGCTCTGGC AGATAGACGG AGTGGAGCAT GTCTATTCCA TATCGCGCCG TGACAGCGCC
ATGGCCACGG TACGCTTCTA TGTGGGTGAA AACCGCGAAG ACTCACTCAT CAAACTGCAC
AACACCATTA CCAAAAACAA AGACATGGCA CCGGGCATCG TCACCGGCTG GGCCGTACGC
CCTGTGGAAA TCGACGATGT GCCCATCGTC AGCCTGACAT TGTATCCGGA ACAGGCCGGT
GCTGCCGACA GCCACACGCT GCGGCGCATG GCCGAAGAAA TGCTGAACAG AATTGCGGCC
GTTGAAGATG TTTCATCAGT CACCATCACC GGTGGCGAAC CCCGCCGCGT GCATGTGTAT
CCCGACCCCG AACGGCTCAC GGGGTTTTCT GTTTCCGCGC AGGATGTTGT CACGGCACTT
TCCGGTGCTG ACTCTTCTGT CACCGCGGGG ACGCTGGACA AAAACAACCG CACCCTCACC
ATCACCGCCG ACTCGTTTCT GCGCAGCGCG CGGGAAGTAC GCGGGCTGGT GGTGGGCACA
GACGCGGACA GACCTGTATA TCTGCGCGAT GTGGCCACCG TGCACGACGG CCCGGCAGAA
CCTGTGAGCT ACACGCGCAT AGGCTTTTCC GACCGTACCG CACAGGAAGA AGGCATGCCG
CACGGCTCAT TGCCTGCAGT TACACTGGCC GTTGCCAAAA AAAAGGGTAC CAATGCCGTC
TCTGTGGCGG AAAACGTCAT CCGCGAAGCT AGCAGTCTGC AGCATGACAT TCTGCCCGAC
GGCATAGGGC TGCGCGTCAC CCGCAACTAC GGCGAAACAG CCAGTCAGAA AGTGAATGAC
CTGCTTGCCT CGCTGGGGTT TGCCATACTG ACGGTCGTGG GGCTGCTCAT GCTGACACTG
GGCCGCCGCG AAGCCCTTGT GGTGGCTGTG TCCGTACCGC TCAGCTTTGC GCTGGCTCTC
TTTGTCAACT ACATGCTGGG CTACACCATC AACAGGGTCA CGCTGTTCGC CCTTATTCTT
TCGCTGGGCC TTGTGGTGGA CGACCCCATA ACCAATGTGG ACAACATACA GCGCCACATA
CTGGCACGCA AAAAAGGCCC GCTGGCCGCC ACGCTGGCAG GCGTGCAGGA AGTGCTGCCG
CCTGTGCTCA TGTCAACGCT GGCCATCATA GTCAGCTTTA CACCCATGTT TTTCATTACC
GGCATGATGG GTCCGTACAT GGCACCCATG GCAGCCAACG TGCCCCTTAC CGTCACGTTT
TCCACTCTGG CGGCACTGAC AGTGGTGCCC TGGCTCAGCT ATCTGCTGCT GCGGCACAAA
GCAGTACCGG CAGGACAGCA GACGCCCCCC GCAACCGTCC GGCAGAAAAA TTCCGCCACC
TCCCGTCAAT CAGGCAGGGC AGACCGCGCC TCGCAACTGT ACAGAACTAT CGTTTCGCCC
TTTCTCGACT CAAAGTTCAT GCGCAAATCA ATGCTGGCGG CCATCGTCAT ACTGCTGGCG
GGCAGCTGCT CACTGGCGCT GATGCGGCTT GTCCCGCTGA AGATGCTGCC CTTTGACAAC
AAAAATGAAT TCCAGATTGT CATCGATATG CCCGAAGGAA CCAGTCTGGA AGAAACCGAC
CGGGTGGTAC GCCGTTATGA AACGTATCTG CGCACCGTGC CGGAAGTCAG TGACTTCACC
ACATTTACCG GCACATCATC ACCCATGGAT TTCAACGGTA TGGTGCGGCA CTACTACATG
CGCGCAGAGC CGCATCAGGC CGATATCCGT GTGAATCTGG CTGCAAAATC ACGCCGTGAA
CAGCAAAGTC ACACCATTGT GCTGCGTCTG CGCGACGATC TGCAGCGCAT TGCAGACGCA
TCCGGCGCTG ACATAAAGCT GGTGGAAGTG CCCCCGGGAC CTCCTGTTTT TTCAACCATC
ACCGGCGAAG TATACGGGTC TGCCGAAAAA ACACCGGAGC AGCTGCAGCA GGCAGCCCGG
CACGTTATGG AAATCATGCG GCGCGAACCC GGCGTCACAG ACATAGACTC CACCATGGAA
GCCGCCGCAA CGCGCGTCAA TTTTGTCACC GACAGGGTCA AAGCCGCGCT GCACGGTGTG
GAAACCGAAG ACATTGCCCG CACACTGCGC ATCGCCGCGG GGGGCGTTAT CCCCGCCAAC
GTGCACGAAC CCCGCGAACG CCAGCCCCTG CCGGTCGTCG TGCAGCTGCC GCGCGAAAGC
CGCTCCTCCG TCGCGGCGCT GGAAGCCATG CCTGTTCCCA CCGCTGCCGC GCCGGACATG
CCGCAGGGCG GCATAGTGCC GCTGGGTGAA CTGGGCCGTT TTGTCCAGCT GCCCGAAGAC
CAGCCCATTT ATCATAAAAA CCTGCACCGG GTGGTCTATG TTTACGGCGA GATGGCGGGC
AGAGCCCCCG GTGAAGCGAT TCTGGACATG AACACGGCGC TGAAAAAAGA CCCCATGCCG
CCGGGCACAC GGGTCGACTG GGCGGGAGAA GGTGAATGGG AAATAACCCT GAGCGTGTTC
CGCGATCTGG GACTGGCGTT CGGCGCGGCA CTGGGCGGCA TCTACATTCT GCTGGTCATC
CAGACAGGGG TGTTCACGCT GCCGCTGCTC ATCATGTCGG CCATTCCGCT GACACTGCTG
GGCATCATGC CCGGATTCTG GCTGCTTAAT CTGCTGTTCA CCGGACATGC CGGCGGCTAT
GCCGATCCGG TATTCTTCAC CGCCACATCC ATGATCGGCA TGATAGCACT GGGAGGCATA
GTCATACGCA ACTCTCTGGT GCTCATCGAG TTCATTCAGG AGGCCATCCG GCAGGGCATG
CCGCTGCGCG AAGCCGTACT GGAAAGCGGC ACCACACGGC TGCGGCCCAT TCTGCTCACA
GCGACCACAA CGCTGCTGGG CGCATGGCCC ATCACGCTCG ATCCCATTTT CTCCGGTCTG
GCATGGGCGC TTATCTTCGG GCTGCTGGCT TCCACTGTGT TCAGCCTTGT GGTGGTGCCC
GTAGCGTTTT ACGCTCTGGA ATCACGCAGA ATGCAGACCA CGGAAACGCA GACCGACTGA
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| Protein sequence | MPQHDAAPAG IIPAIVRTFV TGKNALLLLI FGLGLGMAAL LLTPREEEPQ IIVPMADILV
QVPGASAAEV EKLVATPLER LLWQIDGVEH VYSISRRDSA MATVRFYVGE NREDSLIKLH
NTITKNKDMA PGIVTGWAVR PVEIDDVPIV SLTLYPEQAG AADSHTLRRM AEEMLNRIAA
VEDVSSVTIT GGEPRRVHVY PDPERLTGFS VSAQDVVTAL SGADSSVTAG TLDKNNRTLT
ITADSFLRSA REVRGLVVGT DADRPVYLRD VATVHDGPAE PVSYTRIGFS DRTAQEEGMP
HGSLPAVTLA VAKKKGTNAV SVAENVIREA SSLQHDILPD GIGLRVTRNY GETASQKVND
LLASLGFAIL TVVGLLMLTL GRREALVVAV SVPLSFALAL FVNYMLGYTI NRVTLFALIL
SLGLVVDDPI TNVDNIQRHI LARKKGPLAA TLAGVQEVLP PVLMSTLAII VSFTPMFFIT
GMMGPYMAPM AANVPLTVTF STLAALTVVP WLSYLLLRHK AVPAGQQTPP ATVRQKNSAT
SRQSGRADRA SQLYRTIVSP FLDSKFMRKS MLAAIVILLA GSCSLALMRL VPLKMLPFDN
KNEFQIVIDM PEGTSLEETD RVVRRYETYL RTVPEVSDFT TFTGTSSPMD FNGMVRHYYM
RAEPHQADIR VNLAAKSRRE QQSHTIVLRL RDDLQRIADA SGADIKLVEV PPGPPVFSTI
TGEVYGSAEK TPEQLQQAAR HVMEIMRREP GVTDIDSTME AAATRVNFVT DRVKAALHGV
ETEDIARTLR IAAGGVIPAN VHEPRERQPL PVVVQLPRES RSSVAALEAM PVPTAAAPDM
PQGGIVPLGE LGRFVQLPED QPIYHKNLHR VVYVYGEMAG RAPGEAILDM NTALKKDPMP
PGTRVDWAGE GEWEITLSVF RDLGLAFGAA LGGIYILLVI QTGVFTLPLL IMSAIPLTLL
GIMPGFWLLN LLFTGHAGGY ADPVFFTATS MIGMIALGGI VIRNSLVLIE FIQEAIRQGM
PLREAVLESG TTRLRPILLT ATTTLLGAWP ITLDPIFSGL AWALIFGLLA STVFSLVVVP
VAFYALESRR MQTTETQTD
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