| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0412 |
|---|
| Symbol | |
|---|
| ID | 3756305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 409217 |
|---|
| End bp | 409966 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637781272 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_386908 |
|---|
| Protein GI | 78355459 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAACC TCATGACAGA CAACCTCATG ATTGAACTTT CGGACATACA TCTGACTCTA
GAAGGCGGTT CGGGCAAGGT CAATATACTG CGGGGTGTCA ACCTGCAGGT GGACAAGGCA
GAGACCCTCG CCGTGGTGGG GCCTTCCGGC TCGGGCAAAA CCACAACGCT TATGATCATG
GCCGGTCTGG AAAGGCCGTC ATCAGGCTTT GTGCGCGTTG CGGGGCAGAA TCTTACCGGC
ATGCACGAAG ACGCGCTGGC CCGTTTCCGT CGCAGCAATC TGGGCATTGT GTTCCAGTCG
TTTCATCTGG TGCCCACCAT GACCGCACTG GAAAACACCG CACTGCCGCT GGAGTTTGCC
CACCGCCCCG ATGCACGCGA CAGGGCCATG CACGCACTGG CCGCCGTGGG ACTGCAGGGC
CGGGCCGGTC ACTACCCCGC GCAGCTTTCC GGCGGCGAGC AGCAGCGGGT GGCGCTGGCC
AGAGCCTTTG CCGGTGAACC GCGGGTCATT CTGGCCGACG AACCCACCGG CAACCTTGAT
TCCGAAACAG GGCGCCGCGT CATGGAACAT CTTTTCAGCA TGCAGCAGAA GCTGGATACC
ACGCTGGTGC TGATAACCCA CGACAAAACG CTTGCAGCCA ACTGCTCGCG GCAGGTGCAC
ATGGAAGACG GCATGCTGCA CGACGGCTGC CCCCGGTGTT CCGCCGCGCC GGAACCCGCA
GACAGCGCAG AGACCGCCCC CGCACGCTGA
|
|---|
| Protein sequence | MDNLMTDNLM IELSDIHLTL EGGSGKVNIL RGVNLQVDKA ETLAVVGPSG SGKTTTLMIM
AGLERPSSGF VRVAGQNLTG MHEDALARFR RSNLGIVFQS FHLVPTMTAL ENTALPLEFA
HRPDARDRAM HALAAVGLQG RAGHYPAQLS GGEQQRVALA RAFAGEPRVI LADEPTGNLD
SETGRRVMEH LFSMQQKLDT TLVLITHDKT LAANCSRQVH MEDGMLHDGC PRCSAAPEPA
DSAETAPAR
|
|---|
| |