| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0389 |
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| Symbol | |
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| ID | 3756321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 382941 |
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| End bp | 384077 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637781249 |
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| Product | dihydrouridine synthase family protein |
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| Protein accession | YP_386885 |
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| Protein GI | 78355436 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGA TGAAGGTTTC CCGCGAGTCT TGTTTTGATG CGGCATCAGT GGTGCCCGGC
GTGCCATCCG GTTTTGCACA GCCCGTGGTT TCTGACGGGC TGACGGTGCT GCCCGCCGGC
GGTGATGCCC CGTGGCTTGC CCCGCTTGCC GGGTTCACCG ATCTGGCGTT TCGCCTGCTG
TGCCGTGAAT TCGGCGCGCG TGTTGTCTGT TCCGAGATGG TCAGCGCCAA GGGGCTGGTA
TACCGGAGTC CGGGTACGCA TGCTCTGCTG GAAACCTGTC CGCAGGACGC GCCCATGGTG
CTGCAGCTGT TCGGCAACGA GGTGCCCATC ATGGATGCGG CCATGCGCGA ACTGGTGGAC
AAGGGATACC GCTGGTTTGA CCTCAACATG GGCTGCTCTG TGCGCAAGGT GGTCAAAACC
GGCTGCGGCG CGGGTATGCT GCGCGATGTG CCCAATGCTG TCCGTGTGGC CCGCGCCATG
ACGGCCGTGG CGGGGGCGGG CCGTGTGGGG TTCAAGTTCC GGCTGGGCTG GGAACAGGGG
GCACAGGTCT GCATGGACCT TGCCCGCAGG CTGGAGGACG CCGGAGCTGG CTGGCTTACC
CTGCATCCGC GGTTTGCCCG GCAGGGATTC AGCGGGACGG CGGACTGGGA TGCGCTGGCG
CGTCTCAAGG AGCATGTGAC TATTCCCGTC ATTGCCAGCG GCGACCTGTT TACCGCCGGA
GATGCTGTGC GCTGCATGCG TGCCAGCGGG GTGGACGGAG TCATGTTTGC CCGCGGGGCA
CTGGCCAATC CTGCCGTGTT CGAAGATTTT TCCGCCATGA TGTCCGGCGG TGAGCAGCCG
CAGCCCGACC CTGAAAGGAC TGTGCGCATC ATACGTCGGC ATGTGGCACT GGCAAGGGCG
CTGTGCGCCG AAAAAACAGC GCTGTTCAAA ATGCGGACTT TTGTGCCCCG CTATGTACGG
CAGTTTCCCG GAGCGCGTGC GCTGCGCAAC CATCTGGCCT CGTGCCTGAC ATGGGAAGGG
CTGGACCATC TGCTGGATAC TTTTTTTGAG CGGTGGCGGG CGCAGGGCGC GCCCATGCTG
GATGACGGTG CATGCCGTGT TCAGACCGCC CCCGCGGGAG ACGATCAATG CATGTAA
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| Protein sequence | MNMMKVSRES CFDAASVVPG VPSGFAQPVV SDGLTVLPAG GDAPWLAPLA GFTDLAFRLL
CREFGARVVC SEMVSAKGLV YRSPGTHALL ETCPQDAPMV LQLFGNEVPI MDAAMRELVD
KGYRWFDLNM GCSVRKVVKT GCGAGMLRDV PNAVRVARAM TAVAGAGRVG FKFRLGWEQG
AQVCMDLARR LEDAGAGWLT LHPRFARQGF SGTADWDALA RLKEHVTIPV IASGDLFTAG
DAVRCMRASG VDGVMFARGA LANPAVFEDF SAMMSGGEQP QPDPERTVRI IRRHVALARA
LCAEKTALFK MRTFVPRYVR QFPGARALRN HLASCLTWEG LDHLLDTFFE RWRAQGAPML
DDGACRVQTA PAGDDQCM
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