| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0337 |
|---|
| Symbol | |
|---|
| ID | 3756386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 326486 |
|---|
| End bp | 328168 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637781197 |
|---|
| Product | glycosyl transferase, group 2 family protein |
|---|
| Protein accession | YP_386833 |
|---|
| Protein GI | 78355384 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.285985 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAACG CGCCGGAACG CGATTTGATG ACCTCTCTTT TCCGCAGGCA GCATCTGACC
AACGGTTATA CTGATCCCGC ACTGGCCATG CAGATGGCCG ACCATTTGCT GCGTGACCTG
CAGGCTCAGC CGCCGCAGGA GGGGATGCAG CGCATGGCAC TTGCCAGAGG GCTGCTGCGT
CAGGCCCTGT TGCTGAATCC CTTTGATACG GCATTGCGGG GGGTGGTGGC TTCGCTGTGC
GCGGGACAGC GGGCTTCCGA AGTGTATATG CGCTGGCTGG GTGCTGTGCG CGATGTGCTC
GATTCCGGCC CTGCCGTGTA TATGGGCGAT GTGCTGCAAC GGACCACCGC GCTGGAAAAA
GATGACGAAA AGCTGCTGCA CGGCGCGCTG TACGGGGATT CTCCGGCTTA CCGGTTCACC
TGCGCGGGTA TTCTGTGGGA AATAGGCAAC GGTGCTTTTT TTGAACAGGC GGCACGGGCA
TTTGTGCAGA CTCCGGAAGG CGGCATAGCG GCGCCGTTTT TTGCGTGGGG CGCGCTGAGC
ATGAACCGTC CGGAGCTGTG CCGCGAGCTG TTGTCACTTG CCGTACCCGG CCCTGTGTCG
CTGCATGTGA GCGCGGAACT GGCACTGCGT GAAGGGCACA GAGAACAGGG GATAGCTCTG
CTGCGTGATG CCCTGCAGGC CGAACCTGCC TTGTTTTTTC TGGTGTACAG GCTGGTGGAG
ACATTGCGCG GTGCACCGCC TGCCGGTTTT GAAAGTGTGG CCCGCGGCAG AAGTGTCAGT
GTGGCTCTGT ACACATGGAA CAAATTTGAC GTGACTCTGG ATACGCTGCG CAGCCTTGTG
CACAGCGATA TAGGCAATGC ATCCATCACG CTGCTGAATA ACGGTTCTGA TGCGTTTTCG
CCGCGTCAGC TGGAAGATGC CGCGCGGGAA GCCGCCTGCG GCAGGCCTGT GGATTTTATC
CATCTGCCGG TGAATGTGGG CGCCCCGGCG GCCCGCAACT GGCTGTGGCA GCTGCCTGCC
ATGCGGCAGG CGGACTATGT GGCGTATCTG GACGACGATG TGCTGCTGCC CGAAGGCTGG
CTGCGCATGT ACATGCAGTC GCTTGATGAA TACCCGCAGG CTGCGGTGGT GGGGCCCAAG
GTGGTCAACC CCGGCAGCAT CGCGTCAGTG CAGTATGTGC TGCGCAACTT TTACAAGGCG
GGTAACAAGC TCATACGCTT CACAAACAAC GCTCCGCTGT TCTGGGATAT GGGGCAGTAT
GACTACCGCA GTCCGTGCCT TTCGGTCATG GGCTGCTGTC ATCTGTTCAA CAGGCGGTTG
TGCGACAGGC TGGGGGTTCC GCAATTCGAT GTTCGTTTTT CGCCGTCGCA GGTGGATGAT
ATCGAGCATG ATATTCAGGT ATGGAACGCC GGCGGCAGGG TGCTGTATGA CGGGCGTGTA
TGTGTGGTGC ACCGGCAGGA CACCGGCCGC AAGGCGCCGC TGAGCGAGGC AGGCTGGGGG
CATGTGTGGG GCAACCACAT GAAGATGGAG GCAAAGTTTT CCGGCGAGCG TCTGAAAGAG
CTTAAACAGA CGGTGGAAGA CTGCGGCTTC AGTCATTTCA CGGCTGCGCT GCAGACTGTG
GCCCCGCTGC TGAGCCGCGA GGCACGGGGA GAGCTGGCGG CCATGACAGG CGGTGCCGGC
TGA
|
|---|
| Protein sequence | MRNAPERDLM TSLFRRQHLT NGYTDPALAM QMADHLLRDL QAQPPQEGMQ RMALARGLLR
QALLLNPFDT ALRGVVASLC AGQRASEVYM RWLGAVRDVL DSGPAVYMGD VLQRTTALEK
DDEKLLHGAL YGDSPAYRFT CAGILWEIGN GAFFEQAARA FVQTPEGGIA APFFAWGALS
MNRPELCREL LSLAVPGPVS LHVSAELALR EGHREQGIAL LRDALQAEPA LFFLVYRLVE
TLRGAPPAGF ESVARGRSVS VALYTWNKFD VTLDTLRSLV HSDIGNASIT LLNNGSDAFS
PRQLEDAARE AACGRPVDFI HLPVNVGAPA ARNWLWQLPA MRQADYVAYL DDDVLLPEGW
LRMYMQSLDE YPQAAVVGPK VVNPGSIASV QYVLRNFYKA GNKLIRFTNN APLFWDMGQY
DYRSPCLSVM GCCHLFNRRL CDRLGVPQFD VRFSPSQVDD IEHDIQVWNA GGRVLYDGRV
CVVHRQDTGR KAPLSEAGWG HVWGNHMKME AKFSGERLKE LKQTVEDCGF SHFTAALQTV
APLLSREARG ELAAMTGGAG
|
|---|
| |