| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0273 |
|---|
| Symbol | |
|---|
| ID | 3755291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 263801 |
|---|
| End bp | 264721 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637781133 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, permease protein |
|---|
| Protein accession | YP_386769 |
|---|
| Protein GI | 78355320 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCCA GACTGAAACA ATTGCGCGAT TCGGATTTTC TGTATCACTT CGTACGCGAC
AAAATAGCGC TGACCAGCTT CATCGTGGTT GCCGTGCTGG TGCTTTCAGC CGCGTTTGCG
CCGCTGCTCA CCTCGCACAA CCCGTATGAC GGTGCCAGCA TCGACGTAAT GAACGCCGAA
ACGCCTCCCT CGTGGAAAGC CGGCGGTTCC GCCGAATTTC TGCTGGGTAC CGATGCGCAG
GGACGCGACA TGTTTTCCGC CATCCTGTAC GGCATGCGCG TGTCCATTCT TATCGGCATG
GGCGCCGTGG CGCTGCAGGC TTCGCTGGGC ATTCTCATCG GGCTTATGGC CGGATACGGC
TCCAAGCGGC TGGACAGCCT GCTGATGCGT GTTACCGACG TACAGCTTTC ATTTTCTTCA
TACATGGTTG CCATCTTCTT CGGTGCGGTC ATTCAGGCAG CTTTCGGCGT GGCCAAATTT
GCCGAAATCG CCGTACCGTT CATCGTGCTG GTCATCGGTC TTTCCGAATG GCCCCAGTAT
GCCCGTACCG TGCGTGCATC GGTACTGGCC GAAAAGAAAA AAGAATATGT AGAAGCGGCA
CGCGTCATCG GGTTGAAACC GCGGCGCATC ATGTGGCGGC ATATCCTGCC AAACACGCTT
ACTCCGGTGC TGGTTATTTC CACCGTGCAG GTGGCAAACG CCATCATGAG CGAAGCAGCC
CTGTCTTTTC TGGGACTGGG CATGCCCGTT AACCAGCCCT CGCTCGGTTC GCTCATCAAG
TCAGGCTTCG AGTACATTTT CAGCGGCAGC TGGTGGATCA CCCTGTTCCC CGGTGTGGTG
CTGGTGCTGC TTGTGCTCAC CATAAACCTG CTGGGCGACT GGCTGCGGGA TTATCTCAAT
CCCAAACTCT ACAAGGACTA G
|
|---|
| Protein sequence | MLARLKQLRD SDFLYHFVRD KIALTSFIVV AVLVLSAAFA PLLTSHNPYD GASIDVMNAE
TPPSWKAGGS AEFLLGTDAQ GRDMFSAILY GMRVSILIGM GAVALQASLG ILIGLMAGYG
SKRLDSLLMR VTDVQLSFSS YMVAIFFGAV IQAAFGVAKF AEIAVPFIVL VIGLSEWPQY
ARTVRASVLA EKKKEYVEAA RVIGLKPRRI MWRHILPNTL TPVLVISTVQ VANAIMSEAA
LSFLGLGMPV NQPSLGSLIK SGFEYIFSGS WWITLFPGVV LVLLVLTINL LGDWLRDYLN
PKLYKD
|
|---|
| |