| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0130 |
|---|
| Symbol | |
|---|
| ID | 3756578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 122008 |
|---|
| End bp | 122853 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637780988 |
|---|
| Product | regulatory protein, DeoR |
|---|
| Protein accession | YP_386626 |
|---|
| Protein GI | 78355177 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.565465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAG ACGCTACGCC GCCGGTCGGG CTGCGTTTTG CACAAGACAA AACGCACGAG
GTGTTCATGA AGCGATACAG GCACACGCAG ATTCTCGCCC TGCTGGAAAC ACGCTCCGCC
ATACGGGCAA CCGAGGCGGC GGAGATGCTG GGCGTTTCTG TGGGAACAAT CCGGCGGGAC
ATGGCCGAAC TGGAAGCCGG AGGCTACCTG AACAGAACGC ATGGCGGAGC CTTTGCCGCC
ATCGAGGGCG AAGCGGGCTT CATGCGCCGC ACCTGCTGGA ACAGAGACAA AAAGCGTGTC
ATCGGACAGG CTGCGGCAGC ACATATTTCT TCAGGCAGTG TGGTCTTCAT CGACGGCGGA
ACAACGCCGG AGGCCATGCT GCCGTTTCTT GTGGAAAAAA CCTCGCTTAC GGTGGTCACC
TGCGGGCTGA ACATTGCCCT GCAGCTGCTG CGCTGGCCTT ACATCAGCAC CATTCTGCTG
GGCGGCGAAG TACATGCGGA ATCACGCACA GTGACCGGCA CCCTGCCGGT GACACAGCTG
GACTCGTTCG GCATGCGCTT TGACATGGCC GTCATAGCCA CCGCGGGCAT TAGCGCGGAA
CACGGTGCCA CCAACCGCAT GCTGGAACGG CTGGCGCTGA AGCAGCTGGT ACTGCGCAAC
AGCGCTTCAA GCATTCTGGT AGGCGACAGT TCCAAAGTGA ACTGCGCATT TCTGGGCAGA
GTAGCGCCGC TGTCGGCGTT TTCGCTGTGT ATTATGGACG ACGACCTGAC AGATGAGCAG
AAAGCGAAGC TGTCGGAAGC CGGGCGATTC GAATTCGTGC CTCTGGAAGG GAGCAGACGG
CGGTGA
|
|---|
| Protein sequence | MTGDATPPVG LRFAQDKTHE VFMKRYRHTQ ILALLETRSA IRATEAAEML GVSVGTIRRD
MAELEAGGYL NRTHGGAFAA IEGEAGFMRR TCWNRDKKRV IGQAAAAHIS SGSVVFIDGG
TTPEAMLPFL VEKTSLTVVT CGLNIALQLL RWPYISTILL GGEVHAESRT VTGTLPVTQL
DSFGMRFDMA VIATAGISAE HGATNRMLER LALKQLVLRN SASSILVGDS SKVNCAFLGR
VAPLSAFSLC IMDDDLTDEQ KAKLSEAGRF EFVPLEGSRR R
|
|---|
| |