| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0110 |
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| Symbol | |
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| ID | 3756428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 101732 |
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| End bp | 103510 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637780968 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_386606 |
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| Protein GI | 78355157 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTTCA GAAAAAAACA TTCTCTTCCC GGGCCGTTTG CCTCGCCGTG GCTGGTTATC
GGCGCGGCGG TCATTCTGGG CGTGGTGGTT GTGGCACTTT CAGTGCGCAA CATCACCCGT
TCGGAACAAT ACATGGCCAA TATCCTGCTG GAAAAAGGCG GATCGCTTAT CAAGGCATTT
GAGGCCGGAG CACGAACGGG CATGCGCGGC AGCGCGTTCC GCCTGCAGGT GCTGCTGGAA
GAAATGGCCG ATCAGCCGGA TATTGATTTC ATTGCCCTGA CAGACAGGGA AGGCAATATT
GTGGCCCACA GCAACAACGA ACAGGTAGGC AAACGGCTTT TCGGCGCCGA GGTGACCACC
GACCTGCTGC GGCCTGACAC ACGCCCGAGG TGGAGCATTT TCGGGCAGGC CGGTAAACGA
TACTTTGTGG TCTACCGTGA ATTTGCACCG CTGCAGGGCC GCCATGCCCG CAGGGGACAC
ATGATGCCGC ACATGCGCAA CCACGCGTGG GATAACTGGC AGCAGCCGGA CGGCCCGCCG
CCCATCATTT TTGTCGGGTT CGACGTTCAG CCGTTCGAGG ACGCCCGCAG ACAGGACAAA
CAGCACACCA TGACCATGGC AGCCATAGTG CTGCTGTTGG GGGTTGCGGG TTTCATATCG
CTTATCTGGG CACAGAATGT CCGCCGCGCA CGCAAAGAGC TGGAAAGCAC ACAGGCCCTG
TCGGATGAGA TTGTTTCCAA TCTCCCCGAA GGTCTGGTGG TGCTGGATGC CGCCGGAGAT
GTTTCTTTCA TGAACAATGC GGCCCGCGCC ATGCTGGGAG ACGGTACCGC CGCTCACGAT
GCGCACGAAG CAGCCGCAAG CTGCCCGCCG CTGCCGCCGG TACTCATGCA TGCCGTACGC
CAGCTGGACA CCCAGCACAT ACTGAGCGGC AGAGAAACGG TGCTTTCCGG CACCGGAGGC
CCTGTCCCCG TCAGTGTTAC CGGTGCGTGC ATAACAGGCG AAGACGGTTC GCTGATGGGC
AAACTGCTGC TGCTGCACGA CCTGAGCGAA GTGCGCAGAC TGGAAGAAGA AGTACGCAGG
CGCGAAAAGC TGGCAGCCAT AGGCAGTCTG GCTGCGGGGG TGGCTCACGA AATACGCAAT
CCGCTCAGCT CCATCAAAGG CTATGCCACC TATTTCGGCA CCCGCTTTGC CGAAGGCAGC
GAAGACCGCG ATGCCGCCCG GATCATGGTG CAGGAGGTGG ACAGGCTCAA CCGCGTCATT
TCCGACCTTA TCGGTCTGGC CCGCCCGTCG GACCTGTCTT TAAAGCCCAG CAGACCGGAA
TCGCTGGCAG AAAACGTGCT CCGCCTTATC CGGCAGGATG CCGCGGGCAA AAACATAGAC
TTGCGGTTCG CCGCGGCGGA CGACCTGCCG CAGGCAGTGC TCGACCCCGA CAGAGTGACG
CAGGCGCTGC TGAATGTCTG CCTTAACGCA CTGGATGCCA TGGAAAGCGG CGGCGTACTG
ACGCTGAGCG TTGACACCGA CAGTACCTCT TCCGAAGGCC GCAGGCTGCT GCGGTTCAAG
GTGCGTGACA CGGGCTGCGG CATAACGCCC GAAACCCTGA GCACCATGTT TGACCCGTAT
TTCACCACCA AAAGTCAGGG AACGGGGCTC GGGCTGGCCA TTGTGCACAA AATAGTGGAG
GCCCACGGCG GCGAAATAGC CGTGCAGTCT TCCGTAGGCA GCGGAACGGA AATATCTCTC
ATTCTGCCGC TTGAACCGCA ACGCAACGCG AACAGCTGA
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| Protein sequence | MHFRKKHSLP GPFASPWLVI GAAVILGVVV VALSVRNITR SEQYMANILL EKGGSLIKAF
EAGARTGMRG SAFRLQVLLE EMADQPDIDF IALTDREGNI VAHSNNEQVG KRLFGAEVTT
DLLRPDTRPR WSIFGQAGKR YFVVYREFAP LQGRHARRGH MMPHMRNHAW DNWQQPDGPP
PIIFVGFDVQ PFEDARRQDK QHTMTMAAIV LLLGVAGFIS LIWAQNVRRA RKELESTQAL
SDEIVSNLPE GLVVLDAAGD VSFMNNAARA MLGDGTAAHD AHEAAASCPP LPPVLMHAVR
QLDTQHILSG RETVLSGTGG PVPVSVTGAC ITGEDGSLMG KLLLLHDLSE VRRLEEEVRR
REKLAAIGSL AAGVAHEIRN PLSSIKGYAT YFGTRFAEGS EDRDAARIMV QEVDRLNRVI
SDLIGLARPS DLSLKPSRPE SLAENVLRLI RQDAAGKNID LRFAAADDLP QAVLDPDRVT
QALLNVCLNA LDAMESGGVL TLSVDTDSTS SEGRRLLRFK VRDTGCGITP ETLSTMFDPY
FTTKSQGTGL GLAIVHKIVE AHGGEIAVQS SVGSGTEISL ILPLEPQRNA NS
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