| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3561 |
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| Symbol | |
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| ID | 3739860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3995018 |
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| End bp | 3996628 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637780850 |
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| Product | protein translocase subunit yidC |
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| Protein accession | YP_386491 |
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| Protein GI | 78224744 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAA GGGCTTTGAT TGCAGTTATC CTCTCTATTG TATTCTTCTA CGGGTACTCG
GCCCTGTTCC CCCCGCCGAA GAAGGAGGCT CCGGCGCCGT CCGCCCAGCA GGCGGTGACC
GGTTCCCAGC CGGGAGCACC CCAGGCTTCT GTAGCGGCAG TTCCGGCCCC TTCACCTGTG
CCCGCTGCAG CGGTTAAGGC CCAGCAGAAG GAGATAGCCG TCGAGACGCC GGACTATACG
GCGGTCTTTT CGACTCAAGG GGGTAGTCTG ACCCGCCTTG TCCTGAAAAA GTACCGCGAA
ACCGCTGACC TCACCGGCAA ACATGTCACC TTGGTGGACG AGCGCGACCC GTCCGCTTAT
ACCCTCTCCA CCCGTGCCGC CGGCATTGGT CTCGATCCGT CTGCCCTCTT TGTGTCGAGC
GCCGACTCCC TGACCGTGGA GGCAGGGGAG GAGAAGAAGG AACTTGCCTT CACCTGGATA
TCGCCTGCCG GCGTCACGGT CCGCAAGATT TACACTTTCC AGGGTGGCAA CTACGGCATC
GACATGGTCT ACCAGACTGC CAATTCCGGC ACGGCCCGGG TCGGCGCCGC CTTCCAGACG
GTCATGACCT ATCCGGCGGT TCCCCGGGTC AAGGAGAGCC GGCTTGAGAC GTTCGGACCG
GTGACCTTTG CCCAGGACAA GCTTACGGAG GAGAAGGTCA AGGACCTGGT CGGGCAGGGG
AAGAGCTACA GTGCACCTCT CTGGAGCGGT TTTGCCGACA AGTATTTCCT CTCGGCCGTC
GTGGGGCAGG GGGGGAGCAT CGCCACGGCC GCTGTCCGCA GCACCCCCCG GGGGATGCTT
GAGGACACCA TCACCGCACC GGAAACTTCT CTGAATCCCG GCGAGTCGAA ATCCGTCGCC
TATCGCCTCT ACTTCGGTCC CAAGGATCTG GATATCCTCA AGGCACAGGG GAACAGCCTG
GAGCGGGCCA TCGACCTGGG CTGGTTCGCA ATGCTGGCCA AACCGCTTCT CCACAGCCTC
AAGTTCTTCT ACAAGTACGT CCACAACTAT GGCATCGCCA TTATCATTAT CACGGTGATC
CTGAAGATCA TCTTCTATCC CCTGACCCAC TCCAGCTACA AGTCCATGAA GCAGATGCAG
AAGCTTCAGC CGAAGATGCA GGAGGTGCGG GAAAAGTACA AGAATGACCG CGATGCCATG
AACAAGGCGA TCATGGAACT CTACCAGACC CACAAGGTGA ACCCCGTGGG TGGTTGCCTC
CCGATGCTCG TCCAGATCCC GGTCTTCTTC GCCCTCTACA AGGCCCTCAT GTTCTCCATT
GAACTGCGCC ACGCGCCGTT CATGCTTTGG ATCCAGGATC TCGCCGGCAA GGATCCTTAT
TATGTGACTC CCATCATCAT GGGGATCACC ATGGTCATCC AGCAGAAGAT GACGCCGTCC
CAAATGGACC CCATGCAGCA GAAGATGATG ATGGCCCTGC CGGTGGTCTT CACCTTCATG
TTCCTGAACT TCCCGTCGGG ACTCGTCCTC TACTGGCTCG TGAACAACGT TCTGACCATT
ATCCAGCAAT CCTACATCAA CAAGAGCATC GCCGCGGCCG AGGCCAAGTA G
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| Protein sequence | MEKRALIAVI LSIVFFYGYS ALFPPPKKEA PAPSAQQAVT GSQPGAPQAS VAAVPAPSPV
PAAAVKAQQK EIAVETPDYT AVFSTQGGSL TRLVLKKYRE TADLTGKHVT LVDERDPSAY
TLSTRAAGIG LDPSALFVSS ADSLTVEAGE EKKELAFTWI SPAGVTVRKI YTFQGGNYGI
DMVYQTANSG TARVGAAFQT VMTYPAVPRV KESRLETFGP VTFAQDKLTE EKVKDLVGQG
KSYSAPLWSG FADKYFLSAV VGQGGSIATA AVRSTPRGML EDTITAPETS LNPGESKSVA
YRLYFGPKDL DILKAQGNSL ERAIDLGWFA MLAKPLLHSL KFFYKYVHNY GIAIIIITVI
LKIIFYPLTH SSYKSMKQMQ KLQPKMQEVR EKYKNDRDAM NKAIMELYQT HKVNPVGGCL
PMLVQIPVFF ALYKALMFSI ELRHAPFMLW IQDLAGKDPY YVTPIIMGIT MVIQQKMTPS
QMDPMQQKMM MALPVVFTFM FLNFPSGLVL YWLVNNVLTI IQQSYINKSI AAAEAK
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