Gene Gmet_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3456 
Symbol 
ID3739130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3871900 
End bp3872940 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content57% 
IMG OID637780745 
Producthypothetical protein 
Protein accessionYP_386390 
Protein GI78224643 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTCCG GACAATTCCT TGCTGTCATA TCCGCGGCGC TCTTCGGCAT TTCTCCTGTC 
TTATGCAAGC TGGTGATAGG TGAAATGTCG CCCGCCCTGT TGGCAGGCCT TCTCTATTTA
GGGTCGGGGA TCGGACTGCA CATCCTGCTG TTGTTTCAGG GGAAAAAATC AATCGAGGAG
GTAAAGCGGC TATCCCCGAA GAAGCGGCTT GCTTTGCTTG GTTCGATACT CTCCGGCGGT
GTTGTCGCTC CGCTCTTTCT TGCCTACGGC ATTAAATTCG GCACCGCTTC AGAGGTTTCT
CTCCTATTGA ATATTGAAAC GGTGGCAACC ACACTCATTG CGTGGTTTGT CTTCAGGGAG
CATGTGGGCC TCGGCGTTTG GGGGGGCAAG GCGCTCATTC TTCTCGGTTC GGTATTTGTC
ATTCTTAAGA ACGACGGTTC TCTTGCCTTT TCCTTTGCCG GACTGCTCGT CCTTCTGGCC
TGTGCGTTCT GGGGGATCGA CAACAACCTG ACCCGTGACA TCGAGGAGCT GCCGGCAACG
GTTCTCGCCA GCATCAAAGG GTTTGGCGCC GGGGCGTTCA ACACACTCCT GGCGCTCGCT
CTCTCAACCG GAACGGCAAC CGTCCCTCAG GTCGCCGGTT CGCTCCTGAT CGGCGCCATG
AGCTACGGCA TGAGCCTGGT TCTGTTCGTC GAGGCGTTGC GGAGAATCGG TTCCGCCAGG
ACCAGCACCC TCTTTGCCAT TGGCCCTTTC GTCGGGACGT TCCTCTCCGT TCTCATCCTC
GGCGAACGCC CGCCAGCGAC CTATTGGGTT GCCGCTTCAC TCATGCTTGC GGGGATAGCG
CTCCTCCAGC GGGAAATGCA CGGCCACCCC CATACCCACG AGGAGCTTTC TCATTCCCAC
AAGCACCTGC ATGATGAGCA TCATCAACAT GAGCACGCTG AAGGTGAGGG GACGGAGCCC
CATGACCATC CCCACCTGCA TGAGCCGCTC ACCCATTCTC ACGTTCACTG GCCCGATATC
CACCACAGGC ACAGCCACTG A
 
Protein sequence
MYSGQFLAVI SAALFGISPV LCKLVIGEMS PALLAGLLYL GSGIGLHILL LFQGKKSIEE 
VKRLSPKKRL ALLGSILSGG VVAPLFLAYG IKFGTASEVS LLLNIETVAT TLIAWFVFRE
HVGLGVWGGK ALILLGSVFV ILKNDGSLAF SFAGLLVLLA CAFWGIDNNL TRDIEELPAT
VLASIKGFGA GAFNTLLALA LSTGTATVPQ VAGSLLIGAM SYGMSLVLFV EALRRIGSAR
TSTLFAIGPF VGTFLSVLIL GERPPATYWV AASLMLAGIA LLQREMHGHP HTHEELSHSH
KHLHDEHHQH EHAEGEGTEP HDHPHLHEPL THSHVHWPDI HHRHSH