| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3448 |
|---|
| Symbol | |
|---|
| ID | 3739122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3865597 |
|---|
| End bp | 3866214 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637780737 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_386382 |
|---|
| Protein GI | 78224635 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 78 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGG CCCAAGACAT CAGCACTGCG CTCAACAGCC ACCCGGTTCG CATTATCGAG
CCTGGCAAAC GCGCCCATGC CGCAGTGGCC CTGATTCTGG AGGAACAGCC AGACGGGCCG
AACATCCTCT TCATCCAGCG GTCAACCGAC GAATGCGATT ACTGGTCTGG CCAGATCGGG
TTCCCGGGAG GGAGGGCGGA ACCCGGTGAC AAGGGGCCGC AAGAGACTGC CGAGCGGGAG
ACGCGTGAAG AGATCGGCCT GGATCTTGGC ACCGCAACGT ATCTTGGACG GCTCAATGAC
CTTGTGCCCG GCGGCTTGCA GATCGTTATT TCGTGTTTCG TGTATGCGGT AGACCGACAG
CCGATCCTGA ATCTGGACAG AACGGAAATA GCCCGTGCCT TCTGGCTGTC GGTCCGTGAA
TTGAACAACC CTGCCCGCCT TACCCGGGTG GAATTTATCG GTCGGAGAAG GCAGAGGAGA
TTCCCCGCAT TGCGACTCGG CGACGGGACG GAACAGCCGC TCTGGGGGAT AACGTACCGG
TTACTGCGCA ATCTGGACAA GATACTCAGG GGTGCCGGCA AGCAGGTGCG GAGTACCTGC
AAGGAGCAAA AACCATGA
|
|---|
| Protein sequence | MKQAQDISTA LNSHPVRIIE PGKRAHAAVA LILEEQPDGP NILFIQRSTD ECDYWSGQIG
FPGGRAEPGD KGPQETAERE TREEIGLDLG TATYLGRLND LVPGGLQIVI SCFVYAVDRQ
PILNLDRTEI ARAFWLSVRE LNNPARLTRV EFIGRRRQRR FPALRLGDGT EQPLWGITYR
LLRNLDKILR GAGKQVRSTC KEQKP
|
|---|
| |