Gene Gmet_3310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3310 
Symbol 
ID3739401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3725357 
End bp3725911 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content61% 
IMG OID637780600 
Productputative lipoprotein 
Protein accessionYP_386248 
Protein GI78224501 
COG category[S] Function unknown 
COG ID[COG3521] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTC GAGCCGCTTT GCTGCTCTAT GTATCCGCCA TAGCATCGCT TTGTTCCTGC 
ACCTCCACTC CGAAGGCAAC GCCTCCGCTG GATTGGGGCT ACGAAAAGGA GGCGATCTCC
GTCACCCTGA AGGGGGACCC GCAGCTGAAT CTCTTCCAGA AGAGTCCCCA CGCTCTCGTG
GCCTGCCTCT ACCAGCTCCG GGACCCCAAT GCCTTCAACC AGTTCCGCAC CGAGCCCGAC
GGCCTGACCA AGCTTCTGGA GTGCGGCCGC TTCGATCCGG GAGTGGCGAC CGCCAAGCGG
ATGGTGATCC AGCCGGGACA AGAGGTGAAC GAGTCCCTGG ACCGAGCCGA AGGGGCCCGC
TACGTGGGGT TCGTTGCCGG CTACTACCGC CTTGACAAGG ATCGCTCGGC ACGGCTCTAC
ACCATCCCCT CAGTGGAAGA GACCAAGGGT TTCCTCAGCC GGACCAAACT CGTGAAACCG
GGACGGCTTG ACATGAAACT CCTCCTAGGT CCCCAGGAGA TCCAGGACGT GACTGAGGAG
ACCGAAAAAC CATGA
 
Protein sequence
MKRRAALLLY VSAIASLCSC TSTPKATPPL DWGYEKEAIS VTLKGDPQLN LFQKSPHALV 
ACLYQLRDPN AFNQFRTEPD GLTKLLECGR FDPGVATAKR MVIQPGQEVN ESLDRAEGAR
YVGFVAGYYR LDKDRSARLY TIPSVEETKG FLSRTKLVKP GRLDMKLLLG PQEIQDVTEE
TEKP