| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3261 |
|---|
| Symbol | |
|---|
| ID | 3741245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3670633 |
|---|
| End bp | 3671427 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637780550 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_386199 |
|---|
| Protein GI | 78224452 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3000] Sterol desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.0633506 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0000000000915879 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCACGACG AAGCGCTGAT CAGGCTCGCT TTTTTCTTCG GCGTGCTGGC GGCGGTTGCC
ATCTGGGAGG TGGCGGCTCC GCGCCGACGG CTCACTGACA GCAAGGCACG GCGTTGGTAC
ACCAATCTCT CCCTAGTAGC CATCGACACC GCGGTGGTAC GCCTGACCCT TACCGTCCTC
CCCGCTGACA TGGCGGTACA GGCGCGCGAA CACGGCTGGG GACTCATGAA CACCGTCGTC
CTTCCGCCAT CGGCCGGGAT TCTTCTGGCC TTCATCGCCC TCGATCTGAT TATTTACCTG
CAGCATGTCC TTTTTCACTT TCTTCCGGTG CTCTGGCGTC TCCACCGGAT GCACCACACC
GACCTTGACA TCGACGTTAC GACCGGCAAC CGCTTTCACC CGGTCGAGAT TTTTCTCTCG
GCCGGGATCA AGCTTGGGGC GGTTGCGCTG CTCGGAGCGC CCGTTGTGGC GGTGGTTGCC
TTCGAGGTGG CACTGAATGC TACCTCAATG TTCAATCATG GCAACATTCG GCTTCCTCTC
ACCTTTGACA GGTGGTTGCG GCTCGTCGTC GTGACGCCGG ACATGCACCG TGTCCACCAT
TCAATTATTC TTCGGGAAAC TAACAGCAAC TTCGGCTTTA ATCTCCCCTG GTGGGACCGC
CTGGCAGGCA CCTATCGTCC ACAGCCCGAA GGCGGCCATG GGGAAATGAC GATCGGGCTT
AAGGAGTTCC GTGATCCGGC ACAGCTGACC CTTTCCCGTC TTCTCGTTCA GCCGTTTGTG
CGCAAATCGA CTTGA
|
|---|
| Protein sequence | MHDEALIRLA FFFGVLAAVA IWEVAAPRRR LTDSKARRWY TNLSLVAIDT AVVRLTLTVL
PADMAVQARE HGWGLMNTVV LPPSAGILLA FIALDLIIYL QHVLFHFLPV LWRLHRMHHT
DLDIDVTTGN RFHPVEIFLS AGIKLGAVAL LGAPVVAVVA FEVALNATSM FNHGNIRLPL
TFDRWLRLVV VTPDMHRVHH SIILRETNSN FGFNLPWWDR LAGTYRPQPE GGHGEMTIGL
KEFRDPAQLT LSRLLVQPFV RKST
|
|---|
| |