| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3254 |
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| Symbol | |
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| ID | 3741273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3663042 |
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| End bp | 3664460 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637780541 |
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| Product | LamB porin family protein, putative |
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| Protein accession | YP_386192 |
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| Protein GI | 78224445 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000000126624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 1.37943e-21 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAAAGA AAGTATTGGC AGTATCCGCA GCCTGTGCGC TGACCGCTGC GACGGCAGTT
CCGGCCCTGG CGCTGGAAAA CGAGTTCCAC GGGATGTTCC GGGTGTTCGG GACGATGTCA
AACTTCAACG ACGGTGGTTC CGGGCGCCTT CTGCCTACAG ACGCAACCAC GGGAAGAGAC
CCCAAGACCA GGAGCTTCGT CGAGCAGCGG GCCCGCCTCA TGTACATCGC CAAGGCCAAC
GACGATCTCA AACTGGTTAC CCACTTCGAG ATCGACTCCC GCTGGGGTGA CAACTCCTAT
GCCAACGGCC GCAACTCCGG CGGCGCCATC GGCGCCGACA CCGTGAACCT GGAAACCAAG
AACGTCTACC TCGACTTCAA CATCCCCTCC ACCCCCATGA ACTTCAAGGT CGGTATCCAG
CCGCTCGTCG ACTCCTACAA GGGGGTCTTC TTCAACACCG ACGTGGCCGC AGCCCTTGCC
ACCGCCAAGC TCGGCAACGG TTCCGTGGTG GTCGGCTTCG CCCGGTTGGA CGACGCCGAC
ACCTTTACCC TTGGTTCAGC AGCTGGCAGA TCAACGTCCA CCCCCGGTAA GGCCAAGCGC
GACCTCTACA TCGTGGACGG CAAGTACAAC ATCACCAAGG ACGTGAAGGT TGGGGCCTCC
TACTACCTCC TCAACGTCGA TCAGAAGGCC GGGGATAACT TCGTCCCCAC ATCAACCACC
CAAACTTATG ACTACATGCG CCACACCTTC GGCGTGAACG CTGAAGCAAA GTTCGCACCT
CTCACCCTGG ACGGCTTCCT CCTCTATCAG ACCGCCCGCA CCAACGGGCC GGACAAGATC
GACCAGAAGG GCTGGGCCGC CAACCTTACC GGCAAGGGGA AGCTGGGCCC TGGCACCCTG
AAGGCGTCGT TCCTCTATGC CTCCGGCGAC AGCAAGAGAG GCACGGTAAG AGATGACAAC
ACCTATTACG GGATCACCAA CGAGACCTCT GGAGCCAACG GCGAGCACAG CTTCTATGAG
TCCGACATGA TGATCCTGTT CCGGAACAAG TACAACATTA CCGGCGACCG GGCCATCGTG
TACAACGTGA CCAACGTCAT CGGCGGCTTT GTGGGCTACA ACGCCAACAT TACTCCCAAG
GCCTTCGCCA ACGTCAATGC CGGTTTCGTG GCTGCCGCCA CGGGGAACGA CGACTTCGGT
TCCGCGCGCG TCACGATTGG CGGCCACAAG AGTGATTACC TCGGCACCGA GATCAACGGC
GAAATCGGCT ATAAGGTGTT CGACAACCTG ACCGCCAGCC TCCAGGGCGC CTATGTGTTC
CTTGGCGACT ACTACAAGGA TACTGTCGGC ACGGCAGCCA ATCCTCAAAC CCCGCGCGAC
CCGTACGAGG GCCGCATCAT GCTGAACTAC GCATTCTAA
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| Protein sequence | MKKKVLAVSA ACALTAATAV PALALENEFH GMFRVFGTMS NFNDGGSGRL LPTDATTGRD
PKTRSFVEQR ARLMYIAKAN DDLKLVTHFE IDSRWGDNSY ANGRNSGGAI GADTVNLETK
NVYLDFNIPS TPMNFKVGIQ PLVDSYKGVF FNTDVAAALA TAKLGNGSVV VGFARLDDAD
TFTLGSAAGR STSTPGKAKR DLYIVDGKYN ITKDVKVGAS YYLLNVDQKA GDNFVPTSTT
QTYDYMRHTF GVNAEAKFAP LTLDGFLLYQ TARTNGPDKI DQKGWAANLT GKGKLGPGTL
KASFLYASGD SKRGTVRDDN TYYGITNETS GANGEHSFYE SDMMILFRNK YNITGDRAIV
YNVTNVIGGF VGYNANITPK AFANVNAGFV AAATGNDDFG SARVTIGGHK SDYLGTEING
EIGYKVFDNL TASLQGAYVF LGDYYKDTVG TAANPQTPRD PYEGRIMLNY AF
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