| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3208 |
|---|
| Symbol | |
|---|
| ID | 3740963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3607551 |
|---|
| End bp | 3608369 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637780495 |
|---|
| Product | Outer membrane lipoprotein carrier protein LolA |
|---|
| Protein accession | YP_386146 |
|---|
| Protein GI | 78224399 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.102941 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0000000000001111 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTT ACAGGCTCGT CATCGTGGTA TTCCTGGCGC TTTTTGTAGG GGCGGTTCCC
GCCACGGCGG CACCGGTGGC TAGAGTGAAC GCCGGCCTTC AGGATGTCAT CGACACGGTG
GAGAAGTCGT TCAGACCGGA CAGGAATACC GGCCTTCCTC CCCTTGCCAC GGTGACTGCC
GACTTTTTCC AGCGTTCGAC CATTGCGGGG AAGGAACGGG AGATGCGGGC CGACGGCCAG
ATGTACTTTA AGACGGCTTC CAGCCGCGAG CCGCTCATGT TCCGCTTCGA CTACTTCCGC
CCCCTGAAGC AGGAGATCGT TTCCGACGGC CGGACCCTCT GGATGTACCT CCCCGAGAAC
CGCCAGGTGA TCGTGAGCGA CGTAACGCCG GTCTTCAATC CCTTTACCTT TAATCCAGAC
CGGGACCGGG CATCGAATTT CCTCCAGGGT TTGCCGCGGA TATCCAAGGA TTTCCTGATT
GTTTTCTCAC CCCAGGGGCA GGACATCGCC GGCAACTACG TACTGGAACT GACCCCTCGC
CGGGCCACCG CGGCCATCGC AAAGCTTTTC ATCGTCGTTC CCCGTGAGGC GGTCCTGAGT
TATGTCCAGA GCGGGAGAAC CTCGGTGAAC ACTATCTCCA ACATCGGCCG GCAGGAGTGG
CCGTTTCCGA TTCTCTCCAC CACCATGGAG GACCATCAGG GGAGCACGAC CCTCATGGAG
TTCAGCAACG TGCGGACGAA CATCATGCTG AGCGACAGCC TCTTCTCGTT TGCTGTTCCG
CCAGGGGTCC AAGTGGTGAA GCCACCCCGG AAGCACTGA
|
|---|
| Protein sequence | MKIYRLVIVV FLALFVGAVP ATAAPVARVN AGLQDVIDTV EKSFRPDRNT GLPPLATVTA
DFFQRSTIAG KEREMRADGQ MYFKTASSRE PLMFRFDYFR PLKQEIVSDG RTLWMYLPEN
RQVIVSDVTP VFNPFTFNPD RDRASNFLQG LPRISKDFLI VFSPQGQDIA GNYVLELTPR
RATAAIAKLF IVVPREAVLS YVQSGRTSVN TISNIGRQEW PFPILSTTME DHQGSTTLME
FSNVRTNIML SDSLFSFAVP PGVQVVKPPR KH
|
|---|
| |