| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3128 |
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| Symbol | |
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| ID | 3740902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3524715 |
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| End bp | 3525827 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637780416 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_386067 |
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| Protein GI | 78224320 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000130607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGATGC GGACAATCAC CGTCCTTCTC CTTTTCGCCG CTGCCGTACT GACGTTTTAC
GGCTGCGGCG GGGGGAAGGA AGGAGCGGAG AAGAGAGAAA AACCCCCTGT CGTGACCGGG
ATCGCGGTGG AAAAGGTCGC CGCGGTGACG GTCCCCGAAG GGATTGAAGC GGTGGGGACG
GTGAAGGCCC GCAATGCCGC GGTGATCGCC GCCCGCATCC CCGGTACCGT CACCGGCGTC
TTTGCGGTCG AGGGGGATCG GGTCGGGCGG GGGAAGGTTC TCGTGACCCT GGAGGCCACG
GAGAGCACGG CCCAGGCGGC GGCCGCATCG GCCTCGGCGG AGGAGGCAAG GCGTGGGCTG
GAGGAGGCCC GGGCCCGCAA GCGTCTTGCC GACGCCACTT TTGAACGTTA CCACAACCTT
TTCAGGGAGG AGGCCGTTAC GCGGCAGGAA CTGGATAACC GGCGTGCCGA CAAGGATGTG
GCCGACCAGG GGGTTGCCCG GGCCGAGGCC AGAGTTGCCG CAGCGCGGGA AGGCGCCCGG
GCCGCCGGTG CCGTTGCCGG CTACACCCGG ATCACCGCAC CCCTGACCGG GGTGGTCACG
GCGAAACAGG TGGAGCGGGG GATGACGGTC TTCCCCGGCA CGCCGCTTCT CACCGTTGAG
GAGGAGGGGA ACTACCGCCT TGAGGTGGCG GTTCCCGAGT CCCTGGTGGC CAAGGCCAAG
GTGGGCGCCA CGGTGCGGGT GGCCGTGGAT GGCGCCGGTG CGGCTGCATC CGGACGCATC
GCCGAGGTGG TTCCGGCCGC CGACCCGGCG AGCCGCACCT TCACCGCCAA GGTGGATATT
GCCGGCAAGG GGCTGAAGTC GGGGATGTTC GGCCGGGTCC TTTTATCCAC CGGGGAAAAG
AAGGGGATCC TCGTGCCACG GGGGGCGGTG CTGGAGCGGG GCGCCCTCAC CTCGGTCTGG
GTGGTTGACG GGCGCAACAT CGCCCGGATG CGGCTCGTGA AGCCCGGAGC GGTCCAAGGG
GATCGGGTGG AGATCCTGAC GGGGCTCACC GAGGGCGAGC GGGTCGTGAC GAGCGGCATG
GAGAAGGTTG TCGAAGGAGC GGAAGTCCGG TAG
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| Protein sequence | MRMRTITVLL LFAAAVLTFY GCGGGKEGAE KREKPPVVTG IAVEKVAAVT VPEGIEAVGT
VKARNAAVIA ARIPGTVTGV FAVEGDRVGR GKVLVTLEAT ESTAQAAAAS ASAEEARRGL
EEARARKRLA DATFERYHNL FREEAVTRQE LDNRRADKDV ADQGVARAEA RVAAAREGAR
AAGAVAGYTR ITAPLTGVVT AKQVERGMTV FPGTPLLTVE EEGNYRLEVA VPESLVAKAK
VGATVRVAVD GAGAAASGRI AEVVPAADPA SRTFTAKVDI AGKGLKSGMF GRVLLSTGEK
KGILVPRGAV LERGALTSVW VVDGRNIARM RLVKPGAVQG DRVEILTGLT EGERVVTSGM
EKVVEGAEVR
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