Gene Gmet_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3020 
Symbol 
ID3740757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3402410 
End bp3402994 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content65% 
IMG OID637780309 
Productmembrane protein 
Protein accessionYP_385960 
Protein GI78224213 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0000130394 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG AAATTCTTCT CCTGGCCGGA GCATACCTCC TCGGCTCCAT ACCCACGGGA 
CTCCTGCTGG CCAAGGCTGC CGGCGTCGAC ATCCGGACCA CCGGCAGCGG CAACATCGGC
GCCACCAACG TCTACCGCAC CCTGGGCCGC TCCGTCGGCA TCGCCACCCT GGTGGGGGAC
TGTCTCAAGG GGCTGATCCC GGTCCTCGCC GCCAAATACC TGGGAATGAC CGACCTCTGG
ATTGCCCTTG CGGGGCTGGC TGCCTTTCTG GGGCACGTCT ACACGGTCTT TCTCGGCTTC
AAGGGGGGGA AGGGGGTGGC CACGGCCCTC GGTGTCTTTC TCGGCCTTGC CCCCTTGGCG
GTGCTCATCG CCCTCGGCAT TTTTGTCGCC GTTGTCGCCA CGTCCCGCTA CATTTCCCTC
GGCTCCATAA CAGCCGCGGC AGCCATGCCG CCCGTCGTGG CTTTTCTGAG CGGGCGCCCC
CCCCTCGTTG GCGTGACCGT TGTGATCGCT CTTCTGGTCA TCTGGAAACA CCGGGAGAAC
ATCCAGCGAC TGCGGGCTGG CACGGAAAAC CGCTTCAAGG CATGA
 
Protein sequence
MLIEILLLAG AYLLGSIPTG LLLAKAAGVD IRTTGSGNIG ATNVYRTLGR SVGIATLVGD 
CLKGLIPVLA AKYLGMTDLW IALAGLAAFL GHVYTVFLGF KGGKGVATAL GVFLGLAPLA
VLIALGIFVA VVATSRYISL GSITAAAAMP PVVAFLSGRP PLVGVTVVIA LLVIWKHREN
IQRLRAGTEN RFKA