| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2930 |
|---|
| Symbol | |
|---|
| ID | 3741035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 3316947 |
|---|
| End bp | 3317936 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637780222 |
|---|
| Product | cytochrome c family protein |
|---|
| Protein accession | YP_385873 |
|---|
| Protein GI | 78224126 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000000000304572 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 8.81711e-19 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTCC GCTTCACCCT TCCCCTCGTG GCCTGTACAC TCGCCGTTGC CGGTCTTGCC
TTCGGCATCA GCATCAAAGA CGTGGTCTTC ACCACGAAGG ACGCTGGCAA GATCGTCTTC
AGCCATAAGG TCCATATCGG CAAGAAGGGT ATCGAAAACA ACTGCAAGGC CTGTCACCCT
GCCATCTTCG ACATGAAGAA GAAGGTGACC TACACCATGG CCGACATGGA AAAGGGAAAA
TCATGCGGCG CCTGCCATAC CGGGAAAGAT GGCGTATTCC CCCTCAAGGA TTGCGCCCGA
TGCCACGCGG TGAAGGAAAT CACCTACCAG GTGAAGTCCG CGGGTCCCAC CCCCTTCAGT
CACAAGAAAC ACCTGGCCAA GTACTCAGAC TGCGGCGCCT GCCATCCCAA GCTCTTCAAG
GCCGGCCACA ACAAGCCGGT CACCATGGCC GAAATGGAGA AAGGGAAGTC CTGCGGCGCC
TGTCATAACG GCAAGTCGGC CTTCAGCGTG AATGAATGTG CACGCTGCCA CCTGGTGAAG
GAAGTGGGGC TCACCTCAAA GGAAACCGGC AAGATCATTT TCAGCCACAA ACTCCATGCA
GCAAAGAGGA AGTGCGGAGA ATGCCATAAC AAGCTCTATG AAGCGGGCCG CAACAAGCCG
GTCGGCATGG CTGCCATGGA AAAGGGGAAA TCCTGCGGGG CCTGCCACAA CGGCAAGGGA
CTCTTCGACG TGAAGCAGTG TGCCAAGTGC CACCCCGTCA AAGCTGTAAA CTTCAAAGTA
TCGGGAGCTG GACCGGTCAA ATTCAGCCAC GATGTCCACC TTGCGATGTA CAGTTGCAAC
GCCTGCCACA CCAAGATCTT CAAAGCGGGC CGCAGCGCCA AGGTAGTGAC CATGTTCGAA
ATGGAGAAGG GGAAATCGTG CGGCGCCTGC CACGACGGCA AGAAAGCCTT CAGTGTACGC
GAGGACTGCG TGAAATGCCA CGACATGTAG
|
|---|
| Protein sequence | MRFRFTLPLV ACTLAVAGLA FGISIKDVVF TTKDAGKIVF SHKVHIGKKG IENNCKACHP
AIFDMKKKVT YTMADMEKGK SCGACHTGKD GVFPLKDCAR CHAVKEITYQ VKSAGPTPFS
HKKHLAKYSD CGACHPKLFK AGHNKPVTMA EMEKGKSCGA CHNGKSAFSV NECARCHLVK
EVGLTSKETG KIIFSHKLHA AKRKCGECHN KLYEAGRNKP VGMAAMEKGK SCGACHNGKG
LFDVKQCAKC HPVKAVNFKV SGAGPVKFSH DVHLAMYSCN ACHTKIFKAG RSAKVVTMFE
MEKGKSCGAC HDGKKAFSVR EDCVKCHDM
|
|---|
| |