Gene Gmet_2923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2923 
Symbol 
ID3741028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3310424 
End bp3312049 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content59% 
IMG OID637780215 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_385866 
Protein GI78224119 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.252505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00000000439976 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCGCCTGT CGCTCATTGC CAAACTCTCC CTCGCCATAA GCCTCATCCT CCTCGCCACC 
ATGGGGCTCT TTGCCTACAT TAACGTAGAA CAACTCGAAA AGCTCCTCTA CGAGGAGGCG
GTCATCGATG CCGACAAGCT GAGCGAGACC ATCATCCGCA CCACCCACTA CCACATGCTC
GAAAACAACC TGAAACGGGC CTACCAGATC ATCGACGAGG TAGGGTCCCA GCGGGGAATC
ATTGACCGCA TCAGGATGGT CAACAAATTT GGCCTCGTAA CCCACTCCAC GGACTCAAAG
GAGAAAGGCC TCTATCTGGA CAAGAAGGCC GAGGCGTGCA GCATGTGCCA CTCGGGGCCA
TCTCCCCTTG TCCACGCTAC CACCATGAAT CGCAGCCGTC TCTTCACCAA CAGGGAGGGG
AAAGAGGTCC TGGGCCTCGC CAAGGCAATC TATAACGAGG AGCGTTGCTA CACGGCCCCC
TGTCATTTTC ACCCCAAGGA GGCCAAGGTC CTCGGCGTCC TGGACGTTAT CGTTTCCCTC
GACCAGATGC ACCAGAAGGT ATACGCCTAT CGCAACGAGA TCATCGTTCT CACGGTCCTG
CAGATCGGCC TTATCGCCCT CTGTCTCACC TTCCTCACCC AGCGCCTGGT CAACCGGCCG
GTCCGGGCGC TGGTCAACCA TGCCCATTTG ATAGGCGGCG GCGACCTCGA CGCCACGGTG
AGGGTCAAGA ACCGCGACGA GCTCGGCGAA CTGGCCGATG CCTTCAACGG CATGACAATA
AACCTGAAAA AGGCACGGGT AGAGTTGGAG GATTGGGGCA AAAACCTTGA AGACAAGGTG
GAAGAGCGGA CCCAGGAGAT CAAGAAAATC CAGTCGCAGT TGGTCCACTC CGAGAAGCTC
GCCTCCCTGG GAGAACTTGT GGCAGGGATT GCCCACGAGA TCAACAACCC CCTGACCGGC
ATCCTCGTCT TCGCGTCGCT GCTTGCCAGC GATTCGAAGC TCGATCCGTC CCTGAAGGGG
GACCTGGACC TGATCGTCAA GGAAACCCAG CGCTGCGCCC GAATCGTGAA GGGGCTGCTC
GATTTCTCCA GGGAATCGAT GCCCCAGAAA AAGCCCTCGT CCCTGAACGC CATCATGGAC
GCAACACTGA CGCTGGTCTG CAACCAGTCG AGCTTCCACG ATATCAACGT CATCAAGGAG
TACAACCCCG ACATCCCCGA GATGAACCTC GACCCGAACC AGATCGAGCA GGTGTTTATC
AACCTGCTCC TGAACGCCTG CCACGCCATC GGGGGTCCTG GGGAGATCAG GATCAGAACC
GGCTTCGACC AGGAGCGGGA AGAGGCCTAC GCCGCCATTA CCGACAACGG CTGCGGGATT
CCCGAGGAAC ATTTATCCAA AATATTCGAC CCCTTCTTTT CCACCAAGGA AAACAAGGGT
ACCGGCCTGG GACTTTCGGT TTCCTACGGA ATTATCGAGG GCCACGGTGG GAGAATCGAG
GTCCGGAGCA CCATGGGAGC GGGGACCACC TTCACCTGCT GGCTGCCGCT CAACCATGAC
AGGGCAACGG CTACGGCCGA AGCGGCGGCG GCCAATCAGG CGGCTCCCTT GCCGGAATCC
TCCTGA
 
Protein sequence
MRLSLIAKLS LAISLILLAT MGLFAYINVE QLEKLLYEEA VIDADKLSET IIRTTHYHML 
ENNLKRAYQI IDEVGSQRGI IDRIRMVNKF GLVTHSTDSK EKGLYLDKKA EACSMCHSGP
SPLVHATTMN RSRLFTNREG KEVLGLAKAI YNEERCYTAP CHFHPKEAKV LGVLDVIVSL
DQMHQKVYAY RNEIIVLTVL QIGLIALCLT FLTQRLVNRP VRALVNHAHL IGGGDLDATV
RVKNRDELGE LADAFNGMTI NLKKARVELE DWGKNLEDKV EERTQEIKKI QSQLVHSEKL
ASLGELVAGI AHEINNPLTG ILVFASLLAS DSKLDPSLKG DLDLIVKETQ RCARIVKGLL
DFSRESMPQK KPSSLNAIMD ATLTLVCNQS SFHDINVIKE YNPDIPEMNL DPNQIEQVFI
NLLLNACHAI GGPGEIRIRT GFDQEREEAY AAITDNGCGI PEEHLSKIFD PFFSTKENKG
TGLGLSVSYG IIEGHGGRIE VRSTMGAGTT FTCWLPLNHD RATATAEAAA ANQAAPLPES
S