Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2819 |
Symbol | |
ID | 3741085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3188220 |
End bp | 3191606 |
Gene Length | 3387 bp |
Protein Length | 1128 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637780104 |
Product | putative rRNA methylase |
Protein accession | YP_385762 |
Protein GI | 78224015 |
COG category | [J] Translation, ribosomal structure and biogenesis [R] General function prediction only |
COG ID | [COG1033] Predicted exporters of the RND superfamily [COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases |
TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000245096 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGA ACAGTGGTAC GAAACGCTTT ACCGGGCTTT TCGGGTTCGT TGCCCGCCAC CCGCGGCTGA TTCTCGCGGT TGCTCTCCTC CTTTCAGTCC TCTCGGTGAT CTACACGAAG GAGCGGATGG AGTTCCTCAC GGGCCGGGAC GACCTGATGC CGAAGAACGC CCCCTTTCAG CAGGACTATC GAGCCATTCG GGCCGAGTTC GGCGACCGGG AAGAGATCGC GGTCGTCATC GAGAGCGCTG ACGCAGCCGC GGCCTCCCGT TTCGGCGAAC GGCTCCAGGA GAAGCTGGCC GCGGACCGGA CCCGGTTCCG TGAGGTCTTT TTCCCCGGGG GGATGCCGTT TTTCAAGGAG CACGGCCTCC TCCTCATGCC TCTGGAGGAT ATCCGAAACC TCCGGAAGAA CTTTACCATG GCAAAGCCGG TTCTCAAGGA GCTGGCAACA TCGCCCACCG TCCAGACCCT CTTTACCCAC CTGACCGGCC GGATGGATGC CTACGTGGCC GGTGGCGGGA AGGGGGGGGA GGCTGAGCTG GCCGGCATCA CCTTCATGCT CGACAAGCTC GGCACCGGCA TTGACGCCTT CGGCGGGGGA AAGAAGGGCT CATTCTCCCT GGAGGAGGTA TTCCTCGGGG GGGATTCGGC CCTGGCCCGG GCCGGCCGGA TGCAGATCCT GACGGTTCGG CCGGTGAAGG ACCCCGGGAG CTTTGTCCCG GCCGTGGAGG CCATCGGCGC GGTGCGCAAG GAGGTCAAAG CCCTCAGGGC GCTCCCCGAG TTTGCCGGGG TGACCGTGGG GCTCACCGGG ACCCCGGTCC TCGAATACGA GGAGATGGCC ACCAGCGAGC GGGACATCAC CATCGCCACC GTCCTCTCCC TGGCCCTCAC GGTGGTGCTT CTCCTCCTGG CATTCCGTGG GTTCCTGAAC GTCATGGCGG CCATGGTGAC CCTCATCGTG GCGCTCTGTG TCTCATTCGG CCTGGCGACC CTGGTGGTGG GGCACCTGAA CATCCTCTCC ATGGTCTTTG CCATCATGCT GATCGGCATC GGCATCGAGT ACGGCATCCA GGTGGTGCTC CGCTACCAGG AGGAACTGGG GCTCGGGGAA GGCGAATTGG AGGCCATCAG TACGGGGCTC AACCGCAACA TTTGGGCCAT CGTCATGGCC GCCTCCACCA TTGCCGCGGC CTTTTTCACC TTCGTCTTCA CTGATTTCAA GGGAATCTCA GAGCTGGGTA TCATCGCAGC GCTGGGGGTC TGCGTCTGCG TCCTGGCCAC CTTTACGGTC CTGCCGGCGG TCCTGGTACT TCTGGCGCCG TACCGCAAGC GCAAGGAGGA GGAGCGGGAG GCCCGGGCCG CAACCATTCT TGCCCGCTCT TCCCGGATGA AGGCCCTGGA GCGGTTCCTC TTCGGCCACC CGAAGACGGT CATCGGGATT ACCCTCATCC TTTGCGCCGC GTCCATCTAT CCCCTGGTCC AGACACGGTT CGACTACAAC CTCATGAACC TCCAGGCCAA GGGGCTGGAG CCGGTGGAGT ATGCCTACAA GCTGATGCGG AGCAAGGAGA ATTCGGGCTA CTTCGCCGAG GTCGTGGCCT CGTCCGCCCC GGAGGCCCGT GAGCTGACCC GGCGCCTCGA AGCGCTCCCC GCCGTTGACC ATGTGGTAAG CCTCGCCACC TTTGTCCCCG ATGACCAGGA GGCGAAGATT GCAGAGCTGG CTGCCCTGCG GCGCGAGCTG GCCGACGTGA AGCCCGCCCC CTACGAGGAG GACCTGCGGG TCATGGAGCT CCCCACGGTC TTCGAGAACT TCAGAAACTC CGTGGAGCGG TTGAAGCTTT ACCTGGAAAA GGAACAGAAA CCCGAAGCAA AGCGGGTCGG CGCCTTCCTG GCCACCCTCG ACCGTTTCTT TGCGACCCTT GAAAAGGAGA AGGACAAAAA CGCCCTCGGG ATGCTGCGGG ACTTCCAGGG GGGAATGCTC GCTTCCTTCC CGGAGAAGAT CGGGATGTTT GCCGACAGCC TCGCCGTCAC CCCGGTGACC GAGGCGGATA TCCCGCCCCA GCTTCGGAAA CTGTTTGTGG GGAAAAGCGG GAAATACCTC CTCCAGGTGG CCCCCAAGGA GGAGATTTTC GAGCGGGAGC CCCTGAAACG CTTCCTGGAC CAGGTGCGGA GCGTGGCACC CCGGGCCAAC GGCGAACCGG TCATGGTCTA CGAGTCCATG ACCATCATGC GCGACGCTTA CCTGCGGGCC TTTGTCTACG CCTTTGCCGC CATCGTGGTG ATCCTCTTCG TCACCTTCCG GAGCGTCACC TACACCCTCG TGGGGCTCGT TCCCCTCGTG GTGGGGATCC TTCTCATGGT GGGGGGGATG TGGCTTTTCG GGATCAGCTT CAACTCCGCC AACATCATCG TCATGCCCCT CATCCTCGGC ATCGCCGTGG ACTCCGGCAT CTACATCATC AACCGTTTCC GCCGCGAGGA CGGCGACGCC GCCTCGGTCA TCACGGGCAG CACCGGCCTG GGGGTCGTCT ACAACACCCT TACCATCATG GCGAGCTTTG GCGCCCTCAT GGTGGCCCAC CACCAGGGAG TATTCTCCAT CGGCGCGGTC ATGAGCCTCG GGATGGTGGC CTGCCAGGCG GCCTTCGTGC TGGTGCTTCC GGCGGTTTTG ACGCTGGTCA AGGGCCGGGA CCGGGGACCG GGGACCAGGT TTAGAAGCCA ACCGATTGCA GAGGCGACGA TGAACGGAAA TAATTCAGGA AGAGACGAAG GTTTCAGGGT TGATGCCTTT GCCCGGTCCC CGGTCCCTGG TCCCCGGTCC CGGGGACTTT CCGGCGCCGT GCAGTTGGCG CATTTCTTTC TCCAGGAACG CCTGAGGCCG GGTGACCGGG CCGTGGACGC CACCTGCGGC AACGGCCACG ATACCCTCTT CCTGGCGCAG TTGGTGGGGC CGCAAGGGCG GGTGTGGGCC TTCGACGTCC AGGCAAAGGC CCTGGCCGCC ACGGAAGAGC GTCTCGCCGA GGCTGGTTGC CGTGATCGGG TCGCGCTCGT TCACGGCGGT CACGAGCGCC TTGCCGAGGT GGTCACCGGT CCGGTCCGGG CCGTGGTCTT CAATCTGGGA TTTCTCCCCG GTGCCCCCCG GGAGACCGTC ACCACCCCCG AGACCACCAT TGCCGGCCTG GAGCAGGCTG CGGCGCTCCT CCTCCCCGGG GGGCTCGTAA CCGTCGCGGT CTACACGGGG CATCCCGGTG GCGCCGACGA GGGGGCCGCC GTCGAGGATT GGGCAGCGGC CCTTCCCCCC GGCCGGTTCA ACGTCTGGCA CTGCCGCCAG GGGAACCGGT CCGGAGCGGC TCCCTATCTC CTGATCGCCG AGCGGGTTCC CGCGTAG
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Protein sequence | MEKNSGTKRF TGLFGFVARH PRLILAVALL LSVLSVIYTK ERMEFLTGRD DLMPKNAPFQ QDYRAIRAEF GDREEIAVVI ESADAAAASR FGERLQEKLA ADRTRFREVF FPGGMPFFKE HGLLLMPLED IRNLRKNFTM AKPVLKELAT SPTVQTLFTH LTGRMDAYVA GGGKGGEAEL AGITFMLDKL GTGIDAFGGG KKGSFSLEEV FLGGDSALAR AGRMQILTVR PVKDPGSFVP AVEAIGAVRK EVKALRALPE FAGVTVGLTG TPVLEYEEMA TSERDITIAT VLSLALTVVL LLLAFRGFLN VMAAMVTLIV ALCVSFGLAT LVVGHLNILS MVFAIMLIGI GIEYGIQVVL RYQEELGLGE GELEAISTGL NRNIWAIVMA ASTIAAAFFT FVFTDFKGIS ELGIIAALGV CVCVLATFTV LPAVLVLLAP YRKRKEEERE ARAATILARS SRMKALERFL FGHPKTVIGI TLILCAASIY PLVQTRFDYN LMNLQAKGLE PVEYAYKLMR SKENSGYFAE VVASSAPEAR ELTRRLEALP AVDHVVSLAT FVPDDQEAKI AELAALRREL ADVKPAPYEE DLRVMELPTV FENFRNSVER LKLYLEKEQK PEAKRVGAFL ATLDRFFATL EKEKDKNALG MLRDFQGGML ASFPEKIGMF ADSLAVTPVT EADIPPQLRK LFVGKSGKYL LQVAPKEEIF EREPLKRFLD QVRSVAPRAN GEPVMVYESM TIMRDAYLRA FVYAFAAIVV ILFVTFRSVT YTLVGLVPLV VGILLMVGGM WLFGISFNSA NIIVMPLILG IAVDSGIYII NRFRREDGDA ASVITGSTGL GVVYNTLTIM ASFGALMVAH HQGVFSIGAV MSLGMVACQA AFVLVLPAVL TLVKGRDRGP GTRFRSQPIA EATMNGNNSG RDEGFRVDAF ARSPVPGPRS RGLSGAVQLA HFFLQERLRP GDRAVDATCG NGHDTLFLAQ LVGPQGRVWA FDVQAKALAA TEERLAEAGC RDRVALVHGG HERLAEVVTG PVRAVVFNLG FLPGAPRETV TTPETTIAGL EQAAALLLPG GLVTVAVYTG HPGGADEGAA VEDWAAALPP GRFNVWHCRQ GNRSGAAPYL LIAERVPA
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