Gene Gmet_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2780 
Symbol 
ID3739283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3144614 
End bp3144928 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content57% 
IMG OID637780065 
Producthypothetical protein 
Protein accessionYP_385723 
Protein GI78223976 
COG category[R] General function prediction only 
COG ID[COG4980] Gas vesicle protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0000634208 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACG AAGAAAAAGG GATAAGCGTC GGAACGGTGT TCCTCTCCTT CCTGGCCGGC 
ACGGCGGTCG GTGCGGGGCT GGGGCTCCTG CTTGCTCCGA AGACCGGCAA GGAGATGCGG
GAAAACATCA TGGATCTGAC CGATGATGCG ATCGACAAGA TCAAGGGCTT CACCAAGGAG
GCCCAGGGCA AGATCAAGGA CACCTATGAG GAGACCAAGG ACCTGATCGC CGAGAAGAAG
TCGATCATCA CCTCCGCCAT CGAGGCCGGC AAGGAAGCGA TGGATCGGGA AAAAGAAAAG
TACGGACAGA TGTAG
 
Protein sequence
MADEEKGISV GTVFLSFLAG TAVGAGLGLL LAPKTGKEMR ENIMDLTDDA IDKIKGFTKE 
AQGKIKDTYE ETKDLIAEKK SIITSAIEAG KEAMDREKEK YGQM