Gene Gmet_2200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2200 
Symbol 
ID3739573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2488068 
End bp2488865 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content54% 
IMG OID637779492 
Producthypothetical protein 
Protein accessionYP_385152 
Protein GI78223405 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000014368 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0101984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCA ACGGAGGGAT AAGCTGTATC GTTCCGGATA TTCTAGAACA GTTCCGGGCC 
TTCCGTATTG ATGATACGAA AATCGACAAG CTCCTCATCC TTCATTCCCA CTTCGACCAC
GTTGGCATTG TTCCCTTCTT TTTGCGGCGC AAGCCGGGCA TGGTACTCTA CGGATCATGC
CGTTCCCTGG AAGTTCTCCA AAAACCCAAG GCTCTCCATG CCATCAATGC TGCCAGCCGT
TACGTTATTG AATCCTCCGG TTTGAGCGAA TCCACTGCTT CCTGTGATCT GGAGTGGCGG
GAAGGGTACC CCGGTATTGC CGTTGCCAAC GGTGACATGA TCGATCTAGG TGGCCTTGAG
GTACAAATAT TCGACACCCC GGGGCATTCA CCATGTTCCG TATCCGCCTA TGTTCCTCGC
CTTGAGGCGC TCTTTCCTTC CGATGCCGGC GGCGTCCCCA GCGGGGAAAA GATCGTAACT
TACGGTACGT CCAATTACGG AATATTCGAA GAGAGTCTTT GCCGGTTGAA GGAACTTCCG
ATTGCTTACT ACTGTGCGGA CCATTGCGGT TATGTGACGG GTGACGAGGC CGCCGGCTTT
GTGACGGCAT CACTCGCGGC GGCCACGGCG CGGCGGAACC TGATGATCTC CGTATACCGG
CGTACCGGCA ATCTGGATGA TGCTGCCAGA GAGCTTGCCG AGTACTGTGC CGATGAAAAT
ATCGGTGGTA TCGTTCCCCC CGAAACCTTC GTGGAAGCCC AACGGCAGAT ACTTATGCAT
CTGGTGGGAT TAAAATGA
 
Protein sequence
MLINGGISCI VPDILEQFRA FRIDDTKIDK LLILHSHFDH VGIVPFFLRR KPGMVLYGSC 
RSLEVLQKPK ALHAINAASR YVIESSGLSE STASCDLEWR EGYPGIAVAN GDMIDLGGLE
VQIFDTPGHS PCSVSAYVPR LEALFPSDAG GVPSGEKIVT YGTSNYGIFE ESLCRLKELP
IAYYCADHCG YVTGDEAAGF VTASLAAATA RRNLMISVYR RTGNLDDAAR ELAEYCADEN
IGGIVPPETF VEAQRQILMH LVGLK