Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2184 |
Symbol | |
ID | 3739976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2468791 |
End bp | 2471292 |
Gene Length | 2502 bp |
Protein Length | 833 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637779477 |
Product | polysaccharide export protein |
Protein accession | YP_385137 |
Protein GI | 78223390 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.243697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.000313767 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTTGTGCG GTATTCACTT GGTTTTCGCC GCGGAATTTT TCCCAACCCT GTCCCGGGAG TTGCCACAGG CCTCCCCACA CCGCCCTGCC GCAGCCTTGC CAACGTTTAC ATCCCTATCG TCGGCTGCCA AGGCCTCGCC CCCGGCAGAG GCTTCATCCC CACGGAAAAA TACTGAAGAA GGCAAGACGG TAACGGCAAA AGAATCCTCC GCGGATGCGG ATGAGCTTTC CGCCATTGAA AAAAGCGTTA TTGCCAAAGC CGGCGCAGAA GACAATACCC GCCCTCAGCC CTACGAGGTT CAGGAGCTCA GGCAGTTCGG GTACAACTTC TTCAGGCCAG CCGCGGCCGG TTTCGCTCCC CTTGCCGATA TCCCGGTGGG CCCCGATTAC GTTATCGGCC CGGGAGACCG GATCATCCTG AACCTCTGGG GGAGCGCCGA AGGCACCCAC GAACTGGAGG TGAACCGGAG CGGGGAAATC GTGCTTCCGC GGGTGGGGAG CGTTAAGGTA TGGGGAATCA CCTTCGAGCG GCTGCCGGAG GTGCTGAAAA CCCATTTGTC GAAGATATAC AAGAATTTCG ACCTGAATGT GACCATGGGC AAGCTGCGTG TCATCAAGGT GTACGTGGTC GGCGAGGTGA AGATGCCCGG CGACTACAAC CTGAGCCCGC TCTCGACGCT GATCAACGCC CTTGCCGCAT CGGGCGGCCC CCTGAAAACC GGCACCCTGA GAAATATCAA GATCAAGCGT GGGGGGAAGG TCGTGGAAAC GGTCGATCTC TACGATTTCT TCCTCAAGGG GGACAAGGGA AAGGACATCC GTCTCCAACC CGGCGACACC ATCTTCGTGC CGGTCATCGG CAGGGTCGCC GGAATCGCCG GCAACGTGAA GCGCCCCGCC ATCTATGAAC TGAAGGACGA AAAGAACCTC GGCGATCTGG TTGAGCTGGC GGAAGGGTTC CTTCCCACCG GCTATCTGCA GAGGGTGCAG ATCACCAGGG TCGACGCCCA TGACAAACGG ATGGTTGCCG ATTTCAACAT CGATCCGAAA GGGGCGGGGA AATCCCTGGA TCAGATCGTA CAGGGGATAG CGATCCAGGA TATGGATATC GTCAAGATAT TCCCCATCAA CGCCACCCTC CGTGACCATG TCCGGCTCGA CGGGTACGTG CTCCGCCCCG GAGTCTATGC GCTCCAGCCC CACATGCGGC TGAGCCAGCT CCTGTCCCAG GACAATCTCC TCACCGAATA TTACAAGGAT GCCGCGGAAA TAACCCGGCT CTACCCGCCG GATTCCCATC TGGAAAAAAT ATTCGTCAGT GTCGCCAAGG CGCTTGCGGG CGATCCCGAG CACGACCTGG AACTGAAGGA GTTCGACGAG GTGCGGATCT TCTCCCGCTG GGAGATGGAG GAGATGCCGA AGGTCAAGGT GAACGGCGAG GTGCAGCGGC CGGGAGAATA TCGGCTCTTC GCCAACATGA CGGTCCGCGA TCTCCTCATG GAGGCCGGCA ACCTCAAGAC CTCCGCCTAT CTGAAAAACG CCGAGATCAA CCGGATATCC AAGACCGGCG AGTCGGTTTC ATCGTTTCCC ATCGTCATCA ATCTGGAACA GGCCCTGAAG GGCGATCCGA AGGACAACCT GGTGCTCGCC CCTTTTGACG AGGTGACCAT CAGGAAAATC CCCAACTGGG CCGAGGAAAA GGAGCGATAC GTCACGCTGC GCGGCGAGTT CAGGTTCCCC GGCGTCTATC CGATTCACAA GGGGGAAAAG CTGAGCGCCC TGATCGAGCG TGCCGGCGGC TTTACGGACA AGGCATACCT GCGCGCCGCC AAATACACCA GGGAGCCCCT TCGGGAGCTG CAGCAGAAGA GGATGGATGA GATGGTGGCC GCCTCCGAGC AGGAGATCCT GAAAAAACAG GCCGAGCTGG CCACGACCGC ATCCTCCAAG GAGGAAGTGG AGGCAACCAA GGCGGCCCTG GAGAGCCTGC AGCGCTCCGT GGCGCTGCTG AAGACGGCGA AGGCGGAAGG GCGGCTGGTG ATCCGTCTGG AACAACCCGA CGCGTTCAAG GGAACTGCCT CCGACGTGGA ACTCATGGGG GGAGACACGC TGGAAGTGCC CCCGCAGCCC CATGCCGTGA GCGTCCTTGG GCAGGTCTAC AACCCGACCA GCTTTATCCC CGAGAACAAT GAGGATGTGG CGTTCTATCT GGAGAAGGCG GGCGGTCCGA CCCGAAACGC GGAAAAGTGC GACATCTATA TCGTCCGCGC CGACGGGACG GTCTTGAGCC GCCAGCAGTC GTCCTTTGGC ATCAACTGGA GTGACTCCCA GCGTCGCTGG ACCTTCGGCG GTTTCATGTC AACGACCCTG GAGCCGGGCG ACACCGTCAT AGTGCCCCAG AGATTCGAGA GAATTGCCTG GATGCGGGAA ATCAAGGATA TAGCCGTCAT CCTCGGCAAC CTGGCCCTTG CGGCCGGGGT GATAGTAGCG GCAGGTCTGT AG
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Protein sequence | MLCGIHLVFA AEFFPTLSRE LPQASPHRPA AALPTFTSLS SAAKASPPAE ASSPRKNTEE GKTVTAKESS ADADELSAIE KSVIAKAGAE DNTRPQPYEV QELRQFGYNF FRPAAAGFAP LADIPVGPDY VIGPGDRIIL NLWGSAEGTH ELEVNRSGEI VLPRVGSVKV WGITFERLPE VLKTHLSKIY KNFDLNVTMG KLRVIKVYVV GEVKMPGDYN LSPLSTLINA LAASGGPLKT GTLRNIKIKR GGKVVETVDL YDFFLKGDKG KDIRLQPGDT IFVPVIGRVA GIAGNVKRPA IYELKDEKNL GDLVELAEGF LPTGYLQRVQ ITRVDAHDKR MVADFNIDPK GAGKSLDQIV QGIAIQDMDI VKIFPINATL RDHVRLDGYV LRPGVYALQP HMRLSQLLSQ DNLLTEYYKD AAEITRLYPP DSHLEKIFVS VAKALAGDPE HDLELKEFDE VRIFSRWEME EMPKVKVNGE VQRPGEYRLF ANMTVRDLLM EAGNLKTSAY LKNAEINRIS KTGESVSSFP IVINLEQALK GDPKDNLVLA PFDEVTIRKI PNWAEEKERY VTLRGEFRFP GVYPIHKGEK LSALIERAGG FTDKAYLRAA KYTREPLREL QQKRMDEMVA ASEQEILKKQ AELATTASSK EEVEATKAAL ESLQRSVALL KTAKAEGRLV IRLEQPDAFK GTASDVELMG GDTLEVPPQP HAVSVLGQVY NPTSFIPENN EDVAFYLEKA GGPTRNAEKC DIYIVRADGT VLSRQQSSFG INWSDSQRRW TFGGFMSTTL EPGDTVIVPQ RFERIAWMRE IKDIAVILGN LALAAGVIVA AGL
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