Gene Gmet_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2062 
Symbol 
ID3738656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2318631 
End bp2319731 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content59% 
IMG OID637779356 
Productserine phosphatase 
Protein accessionYP_385016 
Protein GI78223269 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.39738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACTC TTACCGTGCA GAGCCAGAAG GGGATGAGCT CCGATCACCT GAATGAATCG 
GATCGTGAGT TGAGCATGGG GACATACTCC GGCGAAGCAT TCCTCACAAA CTCCACCGTA
GTGGTCAACG ATACGGATTC CATGGACAAG CCCGCCTCCG CCCTGGTTGT GCGACGGGAA
GGAATCAGGT CATTCGCCCA TGCCCCCATC ACGGTCGAAG GGAAACCCGT GGGTATTCTG
TCGGCCTTCT CAAAGTCGAT GAAGGGGATC TTCACCGACG AGTTCGTTGA ACTCTTCACC
AATCTGGCGG GACAGATCGG GATAGCGCTT CGCAACGCCC TCCAGGCCGA GAAGCTGATC
CAGGCGAAGG AGCATGAAAA GGAGATGCAG ATCGCCCGGA CTATCCAGAT GGGGCTCCTG
CCGACGCGGG CGCCGGAAGT GGCGGGAATA TCACTGGCGG GAACGTGTGT CCCGGCCAGG
GAGGTGGGGG GAGATTACTA CGATTTCCTG GTACGCGGCG CCAGGGGTCT CGATCTGGTC
ATCGCCGACG TATCGGGTCA CAACGTCGGT GCTGCCCTCC TCATGGCGGA AGTGCGCACC
ATCATCCAGG CAGAGGCGAA GATCGTCCGG GGTCCCGGCG AGATACTGTG CGTCCTCAAC
GACTTTCTCT ACGAAGACCT CACCCGTGCC GAACTCTTCA TCACCATGTT CTACCTGAAC
TACGATGCCG GGACGCGGCT GCTCTCCTTC GCCAGCGCCG GCCACAACCC GCCGATACTC
AGGAGGTCCG GATCACGGGC CTGTGAGTAC CTCGACGCGG AGGGCCTCAT TCTCGGCATC
AAGAGGAACG TCACGTTTGA GGAAAAACAG GTGCGGCTGG AGCCGGGAGA TCTCCTCCTG
CTCTACACCG ATGGCATCAC CGAGGCGGCA AATCCCGCCG GCGAATTATT CGGCGAGGAC
CGGCTATGCT CCCTTATTGC CGAGTATCAC GCACTCCATC CCCAGCAGAT TATCGACAAT
CTCCTCGCCC AGGTCAGATC GTTCGCCGCA AACCAGAACC TGACCGACGA TGTCTCGCTG
GTCGTTCTGA AGGCACTCTA A
 
Protein sequence
MKTLTVQSQK GMSSDHLNES DRELSMGTYS GEAFLTNSTV VVNDTDSMDK PASALVVRRE 
GIRSFAHAPI TVEGKPVGIL SAFSKSMKGI FTDEFVELFT NLAGQIGIAL RNALQAEKLI
QAKEHEKEMQ IARTIQMGLL PTRAPEVAGI SLAGTCVPAR EVGGDYYDFL VRGARGLDLV
IADVSGHNVG AALLMAEVRT IIQAEAKIVR GPGEILCVLN DFLYEDLTRA ELFITMFYLN
YDAGTRLLSF ASAGHNPPIL RRSGSRACEY LDAEGLILGI KRNVTFEEKQ VRLEPGDLLL
LYTDGITEAA NPAGELFGED RLCSLIAEYH ALHPQQIIDN LLAQVRSFAA NQNLTDDVSL
VVLKAL