Gene Gmet_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2056 
Symbol 
ID3738650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2310406 
End bp2311263 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content57% 
IMG OID637779350 
Productamidohydrolase 2 
Protein accessionYP_385010 
Protein GI78223263 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00516688 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.00129345 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCTCTG AGATTATCGA TGTTCACATG CATTGTTTTG TGGGCCGCCA GCAGGAGACG 
GCTCTTGCCC GCGATATCGC CCTGCTGCGC CGTGAAGGGC TCAGGCGGAT GGTCGTTGCT
GGTCTGGTGA ATACCCACCC GGATCCTGAA ACCACCTGGA ACCTAATTCC CGATTACGTC
GAAAATCATG GGGATCCCCA TTTCAACGAA GCGGATGATT TGCTGGCGCT CGCGGAATCC
GTGGATCACG CCCTATTGCC CTTCGTCGAT ACGCGCTACC TGCGGGGCGA CGTGGCGACA
GCCCTTGACG GGTATATGGG GCAGGGGTTC AAGGGGGTCA AGGGGATCTA TCTACCAGAT
AACGAGAACG ACCTTGGTGT CGGCAACGTG CCGGATACCC TCGGCATCAG TCTCGAACAG
TACCGCCGCA GGGAATGGGA CCTGTTTGCC TACGCCGAGA ACCATGATCT TCCTCTGCTC
TACCACATGG ACGCCCGCCG ATACGGCGAC GTGATGAAAG ACCTTCTGGA CGATTTTCCG
CGGGTACGGG TCAATTTCCC CCACCTGGGG ATCGGCCGCA AGGCGTTCAG TGCGTTTCTC
GACCGCTACC CCAACATCTT TACCGACATT GCCGGCCTTC TGCCGTACAT GCGGAGTAAT
CCCGCCAGTT ACCGCGACTT CATCATGCAC TATCCCGACC GGATCTGCTT CGGAACCGAT
ACCTTTCTCT ATCAGGCCGG CTCTGCCCTT GACTACATCA GCATGGTCAG GGAGCTGAGA
TTGCCTGAAG AAATCGAAGC GCAGGTGTTC AACGGTAACC CCACCAGGTT TCTGGGGTGT
GTCTTGTATG GTGCATAG
 
Protein sequence
MTSEIIDVHM HCFVGRQQET ALARDIALLR REGLRRMVVA GLVNTHPDPE TTWNLIPDYV 
ENHGDPHFNE ADDLLALAES VDHALLPFVD TRYLRGDVAT ALDGYMGQGF KGVKGIYLPD
NENDLGVGNV PDTLGISLEQ YRRREWDLFA YAENHDLPLL YHMDARRYGD VMKDLLDDFP
RVRVNFPHLG IGRKAFSAFL DRYPNIFTDI AGLLPYMRSN PASYRDFIMH YPDRICFGTD
TFLYQAGSAL DYISMVRELR LPEEIEAQVF NGNPTRFLGC VLYGA