Gene Gmet_2037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2037 
Symbol 
ID3739817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2280861 
End bp2281673 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content46% 
IMG OID637779331 
Producthypothetical protein 
Protein accessionYP_384991 
Protein GI78223244 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms 
COG ID[COG3916] N-acyl-L-homoserine lactone synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000173054 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.0917683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGAA GACTTTCAAG GCTCTCTCCC GAACCGGGGC TCGTCGATTA CTTCAACCTT 
CTCTATTCAG TCATACCAGC TGAAACCGAT GAACTCGTGA AGGAAACATT TCGTCTCAGG
TATCAGGTTT ACTGCATCGA AAACGAGTTT GAACCTCCTT CCGAAACTTC ACAGCAAATG
GAAACCGACG AATTCGATAA GAACTCGGTG CACTCCATCA TTAAATACAA CAAAACAGGG
CACTCTATCG GTTCTGTCAG AATGGTTTTG CCGAATGAAC GGGATCACAC CCGCAGCTTC
CCCATCCAGA AGATATGCAG CCACTCGATA TTCACCGACA GAAAACTGTT CTCCCTTTAC
AGACCTATCG AAATATCACG GTTCTGTCTC TCTAAAGAAC TGCGGACGAT GGCAAAGCCA
TGCAAACATA TGTGCGTTCA ACTGACATCC ACAAGAGCCC CCTTTTCACC ATCCTTGCTT
AATCAGCATG GGCCAATACT TGGACTGATC AGAGGGCTTG TCCAGATGAG TAGCGAAAAT
CATGTTACCC ATTGGTTCGC CATTATGGAA CCGTCACTTA TCAGGTTACT GGCTAAGCTC
GCGATATATT TCAAACCTGT AGGATCCCTC ATCAACTATC ATGGCATGAG ACAACCGTGC
TATATAGAAC TGTCAGAGTT ATTGCGGAGG GTCTTTTCCG AGCAGCCACT GGTGTGGGAG
GTATTGACCA ACAAGGGGCA GTTTGACCTG AATCTCACCA ACTACAATGA AAGCCTTTCT
GGTTCCAATC TGAATAAAAT ATCACGATAC TGA
 
Protein sequence
MTGRLSRLSP EPGLVDYFNL LYSVIPAETD ELVKETFRLR YQVYCIENEF EPPSETSQQM 
ETDEFDKNSV HSIIKYNKTG HSIGSVRMVL PNERDHTRSF PIQKICSHSI FTDRKLFSLY
RPIEISRFCL SKELRTMAKP CKHMCVQLTS TRAPFSPSLL NQHGPILGLI RGLVQMSSEN
HVTHWFAIME PSLIRLLAKL AIYFKPVGSL INYHGMRQPC YIELSELLRR VFSEQPLVWE
VLTNKGQFDL NLTNYNESLS GSNLNKISRY