Gene Gmet_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2017 
Symbol 
ID3740674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2256641 
End bp2257750 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content47% 
IMG OID637779311 
Producthypothetical protein 
Protein accessionYP_384971 
Protein GI78223224 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5653] Protein involved in cellulose biosynthesis (CelD) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.555196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.0726848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGCAG AATATTCTGT AGTTATCATC GACAATTTAA GCGGATTCAG CAGGATCCAA 
CAAGAATGGG ATGCGCTGGC TTCACAGTAC CACGACGAAT ATTTTTTCTT GAGTCATGGG
TGGTATGGCC TGTGGCTGAA CTATTTCCTC AAAGGTAGCA GACTGTGCAT TGTAACCGTT
TATAAAGGTG ACAGACTGGT CGCCATTGCG CCTTTCCTCG GCAAAGTAGA GAGAATCAAG
AGAATACCGG TAAGGAAACT GGAGAGCATA GGCAATGCCT ATTCGCCCCT GAGATCTTTG
ATAATTGACA GATCAGAGAG CAAGCAAAGG CTTGGTGAGT TTCTATTCCA GGCGTTAAGA
AAGGTACCCG GCTGGGATAT CGCCCAGATT GGTCCGCTTT ACGATGGGGA ACTGTATTCC
CAGGCTATGG ATCTGCTGCA TTATTCGGGA TGCAATTGGC TCCATAAAGC TGTTGACTGC
AACTGGCGAC TCCCCTGTGA AGGTTTGGCC TATGAAGGGT ATCTGAAATG CAGGGACAAG
GGTGTGCGGC AGGAGATTAA ACGAAGGAAT AAAAAGCTCG GGGAACTGGG CTCTATAGAA
ATTAAGATAG TTAAAGGCCA TGAAGCTGCC GCGTATATGG CGGATTACAG CGACGTTTAT
GAGAAAAGCT GGAAACAGGC CGAGCACCTG GGGCCCGGTT TTCATGTCGA TCTTGGAGAG
ATTGCAGCGC GTGGCAACAA CTTGCTGCTG GCCTTGATGT ATCTTGATGG ACAACCCATA
GCGGCGCAGT ATCGCATTTT GTGCGGAGAC AAATGTTTTT TTCTGAAGAC TGCCTATGAC
TCACGTTATA AGCGGTACAG CGTGGGACTG GTTCTCCTTA ATCATGTATT GCAGTATTTG
ATGGATAGCG AACAGGTCAA AATGGTGGAT TTTGGTCCCG GCAACGAAAC CTACAAGTCT
GATTGGGCAG AAATTAAGGG GAATTACACC AATTTTTATC TGTTTAACAA AACCATCAAG
GGCGTTTTGG CCCATTTTGC CTACACAAAA GTCAACCCGA TTGTGAAACG ATTTGGCAAA
CGGCTTGAGG AAGAAGGGCA TGAAGGTTAG
 
Protein sequence
MSAEYSVVII DNLSGFSRIQ QEWDALASQY HDEYFFLSHG WYGLWLNYFL KGSRLCIVTV 
YKGDRLVAIA PFLGKVERIK RIPVRKLESI GNAYSPLRSL IIDRSESKQR LGEFLFQALR
KVPGWDIAQI GPLYDGELYS QAMDLLHYSG CNWLHKAVDC NWRLPCEGLA YEGYLKCRDK
GVRQEIKRRN KKLGELGSIE IKIVKGHEAA AYMADYSDVY EKSWKQAEHL GPGFHVDLGE
IAARGNNLLL ALMYLDGQPI AAQYRILCGD KCFFLKTAYD SRYKRYSVGL VLLNHVLQYL
MDSEQVKMVD FGPGNETYKS DWAEIKGNYT NFYLFNKTIK GVLAHFAYTK VNPIVKRFGK
RLEEEGHEG