Gene Gmet_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2008 
Symbol 
ID3739880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2247131 
End bp2248270 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content58% 
IMG OID637779302 
Productglycosyl transferase family protein 
Protein accessionYP_384962 
Protein GI78223215 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAT GGATTTTCTG GTTGCTGGTT GTCACGATTT TCTATACCTA CTTCGGCTAC 
GCGCTGCTGA TCCCCCTCAT CGGCCTGTTT GTGAAACGGC CTCTGGACCG GCGCGACATA
ACGCCTCGTG TAACCTTCCT GATCACCGCC TACAACGAGG AGAAGAATAT CCGCAAGAAG
CTGACGGAAG TACTTGCGCT CGACTATCCC TGGGAACAGC TTGAGGTGAT GGTGGCTTCC
GATGGCTCCA CCGACCGCAC TGACGACATC GTGCGCGAGT TCCGCGATCA GGGGGTGGTT
CTGAAGCGGG TCGAGGGGAG GGTTGGGAAG ACCGCCACCC AGAATGAGGC GGTTAAGGCG
GCCACCGGCG ATGTCATCAT CTTCTCCGAC GCCACGACCG TCTACGAGAA GGACGCCATC
CGCAAGCTGG TCCGCAACTA CAACGACCCT GAAGTGGGGG CCGTGAGCGG CCGCTACGAG
TACGTGAACC CCACGGGGGC ACCGGTGGGG ACCGGCTCGA TCCTTTTCTG GAAGTACGAG
AACTTCATCA AAAGCATGCA GACCCGGATC AGGACCATCT CGGGGTGCTG CGGTTGCATC
TACTCGGTGC GCAAGGCGGC CTATGTGCCG CTTCCCGGCG ACATCATCAG CGATCTGGTG
GAGCCCCTCA TGGTGATCCG GGGCGGGTAC CGTGTTGTCT TCGAGCAGGA GGCAGTGGCC
TACGAAGAGA CCACCGAGAA GTCCCACGAG GAGTTCCGGA TGCGCATCCG GGTCATCACC
CGGGCCATGC GGGGCATCCT CTTCGCCCGG GGGCTTCTGA ACCCTTTTCG TTTTCCGTTT
GTTGCCTTTC AGCTCTTTTC CCACAAAGTG CTCCGGTGGC TGATTCCGTT CTTCCTGATC
GGGCTGCTGG TCGCTAATGC ATTTCTGCTC GATAGGCAGT TCTACGTGAT TACCTTTGTG
CTTCAGGTGG CGTTCTATCT GCTGGCGTTG TTTGGTCTCG GGGCTGACCG GGTGGGTAAG
AAGTTCAAGC CCGCCGCGGT GCCGCTCTAT TTCTGCATCG TGAATACGGC GTCGCTTATT
GCTTTTTTCA AAACCCTTGC TGGGCAGAAG ATGGTTACGT GGGAGACGGT GCGCAAGTGA
 
Protein sequence
MSEWIFWLLV VTIFYTYFGY ALLIPLIGLF VKRPLDRRDI TPRVTFLITA YNEEKNIRKK 
LTEVLALDYP WEQLEVMVAS DGSTDRTDDI VREFRDQGVV LKRVEGRVGK TATQNEAVKA
ATGDVIIFSD ATTVYEKDAI RKLVRNYNDP EVGAVSGRYE YVNPTGAPVG TGSILFWKYE
NFIKSMQTRI RTISGCCGCI YSVRKAAYVP LPGDIISDLV EPLMVIRGGY RVVFEQEAVA
YEETTEKSHE EFRMRIRVIT RAMRGILFAR GLLNPFRFPF VAFQLFSHKV LRWLIPFFLI
GLLVANAFLL DRQFYVITFV LQVAFYLLAL FGLGADRVGK KFKPAAVPLY FCIVNTASLI
AFFKTLAGQK MVTWETVRK