| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2000 |
|---|
| Symbol | |
|---|
| ID | 3739872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2238119 |
|---|
| End bp | 2239330 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637779294 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_384954 |
|---|
| Protein GI | 78223207 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTTT TGTTCCTCTC CACCAAGAGC CCCTATCCCC TCATCAACGG CCACAGTCTG
CGCACCTATC ACACGCTGCG GGATGCAGCG CGACGCCATG ACGTGACCTT GGTGACCTTT
ATCCAGCAGC CGGAACACGA GCTGAAGCCT GAGCACATCG AGCACCTCAA GAGTTTCTGC
AAGGAAGTGC ACACGTTCCC GATTCCGGTC GATCAGTCCC GCGCCAAACT GGCCTTTTCG
CTCGGCTGCA ACCTGTTTTC CGACCTCCCT TTTGTGGCGT CCAAATACGA CTCCCCGGCG
ATGCGGGCCA AGATCAGGGA GATCATTGCG AACAACAAGA TTGACCTTGT CCATGTGGAC
TTGCTCCCCC TGTCGGTTTA CCTGAGTGAG TTCTTCCATC TCCCCAAAAT CCTGGTCAAT
CACAATGTGG AATCGATCAG ACTGCAGCGC TGGGCGGAAT CGGACCCGAG TACGCTGAAG
CGGGCTTTCT TGAAACTCCA GTGGCAGAGG CTCTGCCGGT TTGAAAAGGA GATGGTGAAC
CGTTTTGACC GGTGCATCGC CGTTTCTGAG CTGGACCGTG ATGTTCTCGT AGGCATGGGG
ATAACCATTC CGATCTCCGT GGTGCCCAAC GGGACGAATA CCGAGTTCTT CAAGCCCATT
GGACGGCCAC CTGTGGAAAA TTCCGTGCTC TGGCTAGGGC ACATGGATGT CCACACCAAT
CGCGATGCAG TCCTCTATTT CTGGCGCGAG ATTTGTCCGC TGATCCGGCA GCGGCAGCCC
GACGCCACCA TGATCTTTGT GGGAACCGCA CCGCCCCGGG AGATTGCCGA GGCCGCAGCC
AGCGACCCGC GGGTAAGGGT GACCGGCTTC GTGGATGATA TCCGCACCTA TGTGGACGAG
GCACGGGTGG TGGTGGTGCC GATCCGGATC GGCAGCGGTA CGCGGCTCAA GATCCTTGAT
GCCATGGGGA TGGGAAAGGC TATTGTTTCA ACCTCGGTGG GATGCGAGGG GCTTGCGGTG
GAGCATGGCA GGAATATACT TGTTGCCGAC ACCCCCGAAG CGTTTGCAGA TGAGGTCATG
TCCGTCCTTG CGAACAGGGA TTTGCGTGAA GCACTTGAGC GGAATGCGCG GGAATGCGCC
CTTACCTACG ATTGGGGCAG GCTGTGCGAG GAGCAGGAGC GGACCTACCA GGCCGCCGCA
GGAGGTACAT GA
|
|---|
| Protein sequence | MNVLFLSTKS PYPLINGHSL RTYHTLRDAA RRHDVTLVTF IQQPEHELKP EHIEHLKSFC
KEVHTFPIPV DQSRAKLAFS LGCNLFSDLP FVASKYDSPA MRAKIREIIA NNKIDLVHVD
LLPLSVYLSE FFHLPKILVN HNVESIRLQR WAESDPSTLK RAFLKLQWQR LCRFEKEMVN
RFDRCIAVSE LDRDVLVGMG ITIPISVVPN GTNTEFFKPI GRPPVENSVL WLGHMDVHTN
RDAVLYFWRE ICPLIRQRQP DATMIFVGTA PPREIAEAAA SDPRVRVTGF VDDIRTYVDE
ARVVVVPIRI GSGTRLKILD AMGMGKAIVS TSVGCEGLAV EHGRNILVAD TPEAFADEVM
SVLANRDLRE ALERNARECA LTYDWGRLCE EQERTYQAAA GGT
|
|---|
| |