| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1982 |
|---|
| Symbol | |
|---|
| ID | 3739204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2210929 |
|---|
| End bp | 2211798 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637779276 |
|---|
| Product | GTP-binding domain-containing protein |
|---|
| Protein accession | YP_384936 |
|---|
| Protein GI | 78223189 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2229] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.079955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.121874 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGT TTAACAGAAC GAAGCGTGAG ATCAACGCTA AGATCGTTTA CTTCGGATCT
CCCCTTGCCG GCAAGGCCAC GACACTTCAG TTTATCCACC GGAAATTGAA GCCGGAATGC
CGCGGCCCCA TGAAAACAAT GGGGGGGCAG TCGGACCGAA TGCTCTTCTT TGATTTTATG
CCCCCTGAAC TGGGGGAGGT TAACGATTAT CGGGTCCGCT TCCATCTCTA CACGGTTCAA
GGAGAGGTGA CCAATCGCTC CACCTGGAAG ACCGTTCTCA AGGGGGCCGA CGGCATAGTA
TTCGTTGCCG ACGCATCGCC GGAATCAGCC GCGATTACCC GGGAGAGCAT GGAAAACCTG
AGGGAATGCC TGAGAAGTTA TGGGCAGGAT TTGGAGAAGC TTCCCTGTGT GGTACAGTGC
AACAAGAGTG ACCTGCCCGA TGCCCTCTCC ACCGAAGAGT TGGCGCAACT GGTCGATTCT
GCGGGGTTCC CCGTGATTAG ATCTGCTTCC AGAACAGGCG AGGGAATCCT TCAGGTTCTT
TCCTCGGTGG TGAAAGGAGT CATGAACGCG CTCCGGGACC AGGAGGGGAG TGTGACAGCG
GACTCTTCAG TGGGACTGGC AGGAATGGGA TCAGAGGATG AGCAGGCGCC GGTGGAGAGG
GGCGAAAAGA TGGCTACCGT TCCCACCGAT TTGGCGGAGA GAGTCGATAC TCTCCCGGGT
GCAGCTGTGC CTACCCTTGC CATGGGGGGG GCGGTAACGG TAGCGGCGGA CGGGACTCTG
CAGGTACCCC TCACTGTTGG GTGCGGTGGG GCCGAAAGGG GATTTGTCCT CACACTCGAG
CTGACCCCTG CCGCATCCGT GGTCGCATGA
|
|---|
| Protein sequence | MALFNRTKRE INAKIVYFGS PLAGKATTLQ FIHRKLKPEC RGPMKTMGGQ SDRMLFFDFM
PPELGEVNDY RVRFHLYTVQ GEVTNRSTWK TVLKGADGIV FVADASPESA AITRESMENL
RECLRSYGQD LEKLPCVVQC NKSDLPDALS TEELAQLVDS AGFPVIRSAS RTGEGILQVL
SSVVKGVMNA LRDQEGSVTA DSSVGLAGMG SEDEQAPVER GEKMATVPTD LAERVDTLPG
AAVPTLAMGG AVTVAADGTL QVPLTVGCGG AERGFVLTLE LTPAASVVA
|
|---|
| |