Gene Gmet_1969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1969 
Symbol 
ID3740149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2198123 
End bp2199634 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content58% 
IMG OID637779263 
Productglycosyl transferase, group 1 
Protein accessionYP_384923 
Protein GI78223176 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.0847946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGTT TCCCGAAATC AGATAACGTG GATATCATGC TGCTTCTGGA GGGGACCTTC 
CCCTACGTCA GCGGCGGGGT ATCCAGCTGG GTCAACCAGA TCATACTGGC GTTTCCGGAA
TACCGGTTCG GCGCGCTATT CATCGGCAGC AGCCGCAGTG ATTACGGCGA ATTTAAGTAT
GATCTTCCGC CAAACCTGGT CCACCTGGAG TGTCATTACC TCCATGACGA ATTGGCTATG
CCCGCCATCC GCCCCATGGC GGGCAACTCC GGCGCATTCG AAACCGTGCG GCGCATCCAT
GAATTGTTTC TGCGTCCTGA CGAAGGTACG CTTGACCGTG CTCTGAAAAC GCCGGACTTC
TACCTTGACT CCAACAACGG AGCGAACTTC GAACAGTTCC TCTACTCGAA AAAATCCTGG
GAGCTGATCT GTGATCTCTA CCAGGAACGC TGCACTGATC CTTCCTTCGT CGATTATTTC
TGGACAGTCC GTAACATGCA TACTCCCATC TGGCTGCTGG CCGCCATCGC AAAGCGACTC
ATACCGGCGC GGGTGTATCA TACGGTGTCA ACCGGCTATG CCGGTTTCCT GGGCGCACTT
CTTCACCACA ACAGCGGGCG GCCGCTGATC CTGAGCGAAC ATGGCATCTA CACCAAGGAG
CGGCGCATCG ATATCTTCAG CAGCGACTGG ATCCAGGACA ACCGCAATGC CCTGCAGAAA
GACCCCACGG AAGTAAGCTA TTACCGCGAC CTCTGGATAC GGTTTTTCGA AACCATCGGC
CGTTTCTGCT ATGGGGCGGC AAGCAATATC GTGTCACTCT ACGAAGGGGC CAGGGAACGC
GAAATAGGTG ACGGAGCCCC CCGTGAGCGC ACCATGGTGG TACCCAACGG AATCAATATC
GCCCGGTTCG CGAAGCTGCG GGAGCGACGC CCTGACAACC CTCCACCGGT ACTGACCCTG
GTGGGGCGGG TGGTGCCTAT CAAAGACATC AAAACTTTTA TCCGTGCCCT ACGGCTGGCT
GCCAACAGCC TGCCGGGGGT TCAGGGATGG ATCATCGGCC CCGAAGACGA AAACCCTGAG
TATGCCGCCG AGTGCCGTGA TCTTGCGGAA AGTCTCCACA TCGCCTCGAA TCTCAGCTTC
ATGGGATTCA GGAATCCAAT GGAGATTTTC CCGGATACCG GCGTCATGAT CCTCAGCTCG
GTCAGCGAAG GGGTACCCTT GGTCATTCTG GAGGCGTTTG CCGCCGGCAT ACCGGTCGTG
GCAACCGATG TCGGCGCCTG CCGCCAGCTG ATCATGGGCC ACGGCCAGGA GGACGAGGCC
ATCGGCGCGG CTGGAGGGGT GGTATCCATC AACAACCCCC ATGACCTTGC AGGGGAGGCC
CTGCGGCTCC TGAAGGATCC CGACCACTGG AAACGCGCCA GCAATGCGGC CATTTCTAGG
GTCGAACGTT ACTATACCGA GCAACAGATG TTCGACAGCT ACCGGCAATT GTACCAGCGA
GGAATAGACT GA
 
Protein sequence
MDRFPKSDNV DIMLLLEGTF PYVSGGVSSW VNQIILAFPE YRFGALFIGS SRSDYGEFKY 
DLPPNLVHLE CHYLHDELAM PAIRPMAGNS GAFETVRRIH ELFLRPDEGT LDRALKTPDF
YLDSNNGANF EQFLYSKKSW ELICDLYQER CTDPSFVDYF WTVRNMHTPI WLLAAIAKRL
IPARVYHTVS TGYAGFLGAL LHHNSGRPLI LSEHGIYTKE RRIDIFSSDW IQDNRNALQK
DPTEVSYYRD LWIRFFETIG RFCYGAASNI VSLYEGARER EIGDGAPRER TMVVPNGINI
ARFAKLRERR PDNPPPVLTL VGRVVPIKDI KTFIRALRLA ANSLPGVQGW IIGPEDENPE
YAAECRDLAE SLHIASNLSF MGFRNPMEIF PDTGVMILSS VSEGVPLVIL EAFAAGIPVV
ATDVGACRQL IMGHGQEDEA IGAAGGVVSI NNPHDLAGEA LRLLKDPDHW KRASNAAISR
VERYYTEQQM FDSYRQLYQR GID