| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1962 |
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| Symbol | |
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| ID | 3740142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 2186902 |
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| End bp | 2189655 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637779256 |
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| Product | hypothetical protein |
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| Protein accession | YP_384916 |
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| Protein GI | 78223169 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3868] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01370] possible cysteinyl-tRNA synthetase, Methanococcus type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000223558 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTTTT ATCGTCGTAT ATTGCTGCTG ATCATACTAT TGCTACCAGG CGTTGTCTGG
GGAGAGACAC CTCCTTTAAG CGTGGCCTTG TATTATGGCA AACAGCCGCC AGTCAACGAT
CTGCACGCCT TTGATATTGT GGTTATTGAT CCGGACAGCG GTCTTACTCC GTCCGAGTAT
GGCAGCGGAC GGAGCGAACT CTTTGCCTAC GTCAGCGTCG GAGAGGCGGA CACGGCCCGC
TCCTACACGA AGCAAATGCC GGATAGATGG ATAATCGGCA AGAATCCGGT ATGGAAATCG
AAAATCGTGG ATGTTTCCAG CGAAGAGTGG AAACAATTCT TCCTGGATGA CGTAGTGGAA
CCGCTCTGGC AGGCCGGCTA TCGCGGTTTT TTCCTGGACA CCCTGGATTC CTACCTGATA
GCGGCCCCCA CTGAGGCTCA TCCGCGCATG GAGGCGGGGC TAGTGTCTGT CGTGCGCGCC
ATTCGGCAAC GGCACCCTGA AGCGCGCCTG ATTCTGAATC GCGGCTTCGA GATATTCGAC
CGCGTCAAAG ATCTGGTCTA TGCCGTGGCA GCCGAATCCC TGTTCCAGAA TTTCAATACC
GTTAGTGGCA AGTACGGAGC AGTTGACGAC AAAGATCGCT CATGGCTGAC AAGCCGCCTG
AATGTTATCA GGGAAACCGG TGTCCCCGTG ATCGCCATCG ACTATGTTGA CCCTGGCAAC
CGTCCCCTGA TGAGAGAGAC TGCTGATAAA ATCAGATCCC TCGGTTTTAC CCCCTGGGTG
ACCGACAAGG ACCTGGCAGG TCTGGGGATA GGGAGCGTGG AGGTTATGCC GCGCACGGTA
CTCGGTCTGT ACGATGGCGG CGAGGGTGCC GGTGGCGATC TCTATTTCAC CAACTTGCAG
CGCTATGTGG TAATGCCGCT TAACTACCTC GGCTACACCG TCGAGATGCA TGACATGAGA
GAGCCGTTGC CGGGGGGCGT ACTGAGGGGA CGCTACGCAG GCGCTGTCAT ATGGCCCTAC
TCCACCAGTT CAGGCGAAAA GCAGGGGCTC AAGCAGTGGG TCTTGAACTG TGTTGAACAA
GGTCTGCCAC TGGTTTTTCT GGAACGGTTC GGCATGAACC TCGACAATGA TCTTACCAGT
TCACTCGGAC TTGGAATGGA ATCATACACC CGACTTGAAC CGCCGGCCAA GGTTACGGCA
AAGGATGACA TGGTTGGCTT CGAGCAGCAA CCGCTGCCGC GCATTGATGC CTATCTGCCG
ATCAGGGCGA ACAAGGGCCG GGTTCTGTTG CAGCTTTCAA CGGCCAATGG CGTCACCAGC
GATGCCGTTG TCATCACCCC TTGGGGTGGT TATGTCTCGG GCCCATACGT GGTTACCCAA
CTCATGGAAA GTCAAGCAGC ATGGGTAATT GACCCCTTCC GTTTTTTCGG CGAGGCACTG
AAACTACCGC TGATGCCGGT GCCGGACACA ACCACGGAAA ACGGGGTTCG CCTCCTCCTG
TCTCATGTGG ACGGCGACGG ATTTACAAGC CAGGCCGAAT GGCCCGGAGG AAAACTGGCC
GCCGAGGAGT TGCGAAGCAA GATCCTAGAA CGGTACCGAA TCCCGACTAC AATTTCATTC
ATCACGAGCA TTCTGGCTCC TGACGGCCTC TACCCGCAGA AATCGGCCCA GTATGAAGAG
ATCGCCCACG GTATTCTGGC ACTGCCATGG ATCGAGGGTG CCAGCCACTC CTTTTCGCAC
CCCTTCCGCT GGAAGCCGGA CCAGGAGGAC ACAGGGCTCG AAGCCGAAAT ATGGCATACC
CTGAATGTCC CCGGCTACAA ATTCAACCTT GAGTCAGAAA TCAGCGGCTC TACAAAGTAC
ATCAATGAAA GGCTGATGCC GACCGGCAAG AAAGTGCGCA TTTTCCAGTG GACAGGCAAC
TGTCTCCCTT CTCAGGATGC CGTGCGCCTG ACTTATGAAA GCGGGCTTCT TAATATCAAT
GGCGGCGACA CCATCATTAC CAACTCGAAC CGCACCCTCA CGGCAGTTGC CCCGCTGGGA
ATAAGCCGCG GTAAATGGTT TCAGGTCTTT GCCCCCAACC AGAACGAGAA CGTCTATACC
GAGCTCTGGA TCAGGAATTA TTACGGGTAC AGGCGCATCA TGGAAACTTT CAGCCTGACC
GAATCTCCGC GCCGGCTCAA GCCGGTGAAC ATCTACTACC ACTTCTATTC GGCCAGCAAG
GAAGCCTCCC TGACAGCCCT GCGCCAAGTT TACGACTGGG CCATGGGCCA GCGCCTGTTC
GGAATTTTCA CCTCCGAATA CCTTGAAAAG GCACTCGACT TCAACCGCAC CGTAATCGCC
CGTAGTGGCG ACGAGTGGCT GGTGCGCAAC GGAGGCAGCC TTCGCCAACT GCGCATTCCG
TCCCGTGCCG GCTTTCCCCT GCTGGATGAT GATTCCAATC TGGCGGGATA CAGCGACCTG
GGTGACAGCC GCTACCTGCA CATGGGCACC GGAGGGGAGG CCCGGGTAAG GCTCACCGCT
ACGCCGTCGG CCGGAGTTTC CGTGGAATCC GCCGCAGCCA GGCTGACCGA TTTCAGCCGC
AACGGTAAAA ATATGCGGTT CTCCCTCTCC GGGTATACTC CCTTCACCGT TAAGCTCACC
GGAACCAACG GTTGCACCAT ACATGCAGAT AACGCCACAC CTTACTCGGT CAAGGGCGAC
ACAACGGTAA CTCTCACGGA AGGAAGCCAT GCCCTGGCGA TCACGTGTAA ATAA
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| Protein sequence | MEFYRRILLL IILLLPGVVW GETPPLSVAL YYGKQPPVND LHAFDIVVID PDSGLTPSEY
GSGRSELFAY VSVGEADTAR SYTKQMPDRW IIGKNPVWKS KIVDVSSEEW KQFFLDDVVE
PLWQAGYRGF FLDTLDSYLI AAPTEAHPRM EAGLVSVVRA IRQRHPEARL ILNRGFEIFD
RVKDLVYAVA AESLFQNFNT VSGKYGAVDD KDRSWLTSRL NVIRETGVPV IAIDYVDPGN
RPLMRETADK IRSLGFTPWV TDKDLAGLGI GSVEVMPRTV LGLYDGGEGA GGDLYFTNLQ
RYVVMPLNYL GYTVEMHDMR EPLPGGVLRG RYAGAVIWPY STSSGEKQGL KQWVLNCVEQ
GLPLVFLERF GMNLDNDLTS SLGLGMESYT RLEPPAKVTA KDDMVGFEQQ PLPRIDAYLP
IRANKGRVLL QLSTANGVTS DAVVITPWGG YVSGPYVVTQ LMESQAAWVI DPFRFFGEAL
KLPLMPVPDT TTENGVRLLL SHVDGDGFTS QAEWPGGKLA AEELRSKILE RYRIPTTISF
ITSILAPDGL YPQKSAQYEE IAHGILALPW IEGASHSFSH PFRWKPDQED TGLEAEIWHT
LNVPGYKFNL ESEISGSTKY INERLMPTGK KVRIFQWTGN CLPSQDAVRL TYESGLLNIN
GGDTIITNSN RTLTAVAPLG ISRGKWFQVF APNQNENVYT ELWIRNYYGY RRIMETFSLT
ESPRRLKPVN IYYHFYSASK EASLTALRQV YDWAMGQRLF GIFTSEYLEK ALDFNRTVIA
RSGDEWLVRN GGSLRQLRIP SRAGFPLLDD DSNLAGYSDL GDSRYLHMGT GGEARVRLTA
TPSAGVSVES AAARLTDFSR NGKNMRFSLS GYTPFTVKLT GTNGCTIHAD NATPYSVKGD
TTVTLTEGSH ALAITCK
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