Gene Gmet_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1928 
Symbol 
ID3738112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2153688 
End bp2154185 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content50% 
IMG OID637779220 
Productrubrerythrin 
Protein accessionYP_384882 
Protein GI78223135 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0000521013 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAG AGATCGACGT ACAGGACGCC ATCAAAAAAT CGCTCCAGAC CGAAAAAAAC 
GCCATGAATT TTTACCAGCT CGGCGCGACC CGCATGAAAA ACAAGGACGC CATCAGGGTA
TTCGAACTCC TTGCAAAGGA GGAACGGGAG CACGCCGGCC ATTTCTACAA AATCTACAAA
GGGATCGACA TTCCCGATTT TGATGAGTTC ATGGATGCGC CCCCTGACCA AGAATCGACA
TGGATGGCCG CCATGACCAA AACCGTCAAC TCCGACTTCA CCGAGCAGAA AGCCCTGGAG
CTGGCCATGC ACAAGGAGAA AAAGCTGGAA CACACCCTCC GGGAGACTGC CGGTAAAATC
AAGGATGAAA ACGTTCGTGC CATTTTCGAG CTGAATGCCC GTGAAACCCA CAACCATTAT
GAAATGATCG AATCGGAGTA TGCCCGGATC ATGGCCATGG TGCATGAATC GGATATGGAC
ATTTATGTAC GGGAATGA
 
Protein sequence
MFEEIDVQDA IKKSLQTEKN AMNFYQLGAT RMKNKDAIRV FELLAKEERE HAGHFYKIYK 
GIDIPDFDEF MDAPPDQEST WMAAMTKTVN SDFTEQKALE LAMHKEKKLE HTLRETAGKI
KDENVRAIFE LNARETHNHY EMIESEYARI MAMVHESDMD IYVRE